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nf-core/proteinfamilies: a scalable pipeline for the generation of protein families
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2024 Progress Report
… from the DOE Systems Biology Knowledgebase (KBase), the National Microbiome Data Collaborative (NMDC), and Berkeley Lab Biosciences Area are also co-located in the … complex biological and environmental systems. We optimize our service to the community through responsibly managing …
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Alabama Agricultural & Mechanical University Internship Program
… internship program between Alabama Agricultural & Mechanical University and the Joint Genome Institute. AAMU students spent two months in Berkeley, California honing their scientific skills … confident and ready to tackle real-world scientific issues. Our interns say their experiences allowed them to:  Learn …
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… 2022 marks the JGI’s 25th anniversary. Over the last year, we’ve been revisiting a number of notable achievements that showcase our collaborations and capabilities to enable … tough cell wall materials that keep microbes — and the enzymes that would be produced by microorganisms — out,” …
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CalTeach
… undergraduate majors interested in developing a deep understanding of STEM teaching & learning. Their coursework focuses on STEM pedagogy, educational theory and promoting …
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Secrets of the Needles: What Microbes do on Conifer Leaves
… Novel study looks at microbiomes in aerial surfaces of plants and their roles in plant health and environmental … to do on the leaf surface. More specifically, they found that microbial community composition and functional … tree species and sites, reflecting ecological patterns shaped by both local conditions and the movement of microbes …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both Earth and DNA are close to … our JGI hearts, we’re highlighting genomic science research that feels especially relevant to living on a changing … Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean …
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A Community Resource for Secondary Metabolite Researchers
… The Secondary Metabolism Collaboratory encourages user engagement. The … shared by most living creatures for energy, growth and reproduction—most organisms produce a set of "secondary metabolites," chemical compounds that often confer specialized capabilities that allow the …
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High level of intergenera gene exchange shapes the evolution of haloarchaea in an isolated Antarctic lake
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Major proliferation of transposable elements shaped the genome of the soybean rust pathogen Phakopsora pachyrhizi
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Oxidative cyclization of prodigiosin by an alkylglycerol monooxygenase-like enzyme
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Better Crops With a Pointillist Approach to Plant Genomics
… In this episode, we peer into plant cells. Researchers are using measurements from single … findings could help us grow better crops, with less impact on our planet. …
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