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Complete genome sequence of Planctomyces brasiliensis type strain (DSM 5305T), phylogenomic analysis and reclassification of Planctomycetes including the descriptions of Gimesia gen. nov., Planctopirus gen. nov. and Rubinisphaera gen. nov. and emended
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A Plant Root Atlas for Tracking Developmental Trajectories
… nearly 100,000 single root cells and combining the information with previously published datasets. The work was  … scientist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Research Grant   … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Biotech Partners Summer Intern Co-Authors NAR Paper
… juniors who participated in internships at the DOE Joint Genome Institute this summer through the Biotech Partners … the version 6 data updates and feature enhancements to the Genomes OnLine Database (GOLD) administered by the DOE JGI. … exercise helped us in filling or updating geographic information for nearly 1,100 samples,” said Reddy. Kaushal …
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Training the Next Generation of Talent
… his summer research at the U.S. Department of Energy Joint Genome Institute (DOE JGI), a DOE Office of Science user … Olmstead was back on campus at the University of California, Merced to start orientation as a first-year graduate … DOE JGI that provide hands-on experience in cutting-edge genome research and apply experimental and computation tools …
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Phytozome: Tutorial Workshop from 2022 CROPS Conference @HudsonAlpha
… the June 2022 CROPS Conference at the HudsonAlpha Institute for Biotechnology. Phytozome is the Plant Comparative … Genomics portal of the Department of Energy Joint Genome Institute, and facilitates accurate and insightful …
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Genome sequences of key bacterial symbionts of entomopathogenic nematodes: Xenorhabdus cabanillasii DSM17905, Xenorhabdus ehlersii DSM16337, Xenorhabdus japonica DSM16522, Xenorhabdus koppenhoeferii DSM18168, and Xenorhabdus mauleonii DSM17908
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I-Min (Amy) Chen
… of the Object-Protocol Model (OPM) data management tools for scientific applications developed at Berkeley Lab. Dr. … data management infrastructure of the Integrated Microbial Genomes (IMG) family of systems. Before joining LBNL in … et al. IMG/VR v4: an expanded database of uncultured virus genomes within a framework of extensive functional, …
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The Big Deal About Short Plants
… plant genetic sequences to what they do. But sequencing the genome of one short plant — fire moss — had an unexpected …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… organisms called phytoplankton (from the Greek phyto for ‘plant’ and planktos for ‘wanderer’). But they vary … UEA and including the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … (The Netherlands). … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Partnering with CalTeach – Training the Next Generation STEM Workforce
JGI Five-Year Strategic Plan – “Beyond Basepairs, A Vision for Integrative and  Collaborative Genome Science” – through early introduction to the … technology, engineering, and mathematics (STEM) workforce. In doing so, it is our ambition to further develop a …
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
The Sequence to Function: Applications and Analysis for the Future (SFA²F) meeting brings together established … from academia, industry, and government organizations for three days of scientific presentation, interactive panel … and informal networking events. JGI will present both a genome center talk and a tech talk. Stop by the JGI booth to …
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The JGI Data Portal: Improving User Experience
… agile collaboration between the JGI and the information technology company Truss has resulted in the JGI … “For thousands of scientists around the world, the JGI Genome Portal is a critical resource — it provides access to … more than 13 petabytes of data, accessible through the Genome Portal. “The task of making data more findable and …
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