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Triggering Morel Fruiting
A collaborative team led by Hao Tan from the Sichuan Academy … Grigoriev from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … San Francisco State University, developed a technique to successfully obtain fruiting bodies of morel in walk-in growth …
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You Can Move, But You Can’t Hide
Researchers at the JGI develop a tool to quickly and accurately identify mobile genetic elements like plasmids and … Lead Nikos Kyrpides at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at …
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Understanding Wildfire Recovery, Starting in Soil
A metagenomic look at the soil microbes present a year after … to health, researchers have taken a look at microbial genomes across a spectrum of burned soils. By connecting microbial genes with functions useful for …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
Team develops a computational pipeline to sift and … Information, and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … sequence data, was absolutely critical for the success of this effort and so was the acknowledgement of their …
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Cataloging the Microbes that Manage the Health of River Systems
Database provides details on river microbes in 90% of US … Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the watersheds … the continental United States. They also provided multiple access points to the information. The team harnessed a …
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The Surprising Structure of a Shrub Willow Sex Chromosome
A genetic architecture that is characteristic of the sex … of sex determination could also lead to new approaches to accelerate flowering, which can speed the pace of breeding. … Laboratory and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … scientists to study microorganisms that can’t be cultured by analyzing and then extrapolating data obtained from … coherent pieces called contigs — into genes and even into genomes — from these environmental samples,” said Matthias …
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IMA genome-F18
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JGI Announces 2023 Community Science Program Awardees
Congratulations to the proposers of the 19 proposals selected for … Program call of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … DOE mission, and we look forward to facilitating their success. “ The CSP Annual Call is focused on large-scale …
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Fungus Fuels Tree Growth
Researchers start pinning down how a fungal symbiont spurs … particular interest to the U.S. Department of Energy (DOE). By better understanding how poplar responds to its intimate … partnered with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist Simon Roux , who was … selected as the 2025 recipient of the Microbiome Data Prize by the American Society for Microbiology (ASM). Roux leads …
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Boosting Small Molecule Production in Super “Soup”
Do metabolic pathways from engineered yeasts still work in … Program at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … to increase the productivity rates for pathways of varying complexity. Rasor cautioned that further optimization is …
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