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Olpidium, The Key to the Origin of Terrestrial Fungi
Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the “chytrids”).  A collaborative team … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Triggering Morel Fruiting
A collaborative team led by Hao Tan from the Sichuan Academy of Agricultural Sciences in China and involving Francis … in France and Igor Grigoriev from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring polar bears in winter scenes that came with crayons in various shades of white. To researchers searching for sequences of RNA … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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JGI@25: The Little Alga That Could
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … place in evolutionary history. Retaining ancestral features of both plant and animal cells, it shares nearly 7,000 genes …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
For many scientists, the culmination of their work into a written report that is published in a … above all else, determination. Rhondene Wint, an alumna of the DOE Joint Genome Institute (JGI)-UC Merced internship … said. For Axel Visel, JGI Science Deputy and a co-founder of the internship program, this type of achievement is …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… communities than ever before — especially with the prospect of meta-analyses boosted by AI and Machine Learning — JGI … this was the first workshop of its kind on SIP metagenomics,” Malmstrom said.  Increasingly, efforts like these … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Computationally Classifying Fungal Lifestyles
… genomes to classify gene families. The Science As a proof of concept, researchers developed an algorithm that “taught” … a computer how to classify 101 representative genomes of Dothideomycetes, the largest class of fungi, by …
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Eelgrass Proves to Be Much Younger Than We Thought
… less than previously believed.  The Science Eelgrass, one of the most abundant plants in the ocean, originated in … assumed, due to the wide and varied geographic footprint of the plant, that eelgrass began colonizing the oceans  … Program (CSP 502951, 2016, Population and evolutionary genomics of host–microbiome interactions in Zostera marina …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… tiny algae. The cold polar oceans give rise to some of the largest food webs on Earth. And at their base are … is displacing these important cold-water communities of algae with warm-adapted ones, a trend that threatens to … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Green Algae Reveal One mRNA Encodes Many Proteins
… a single protein. Recently reported in the Proceedings of the National Academy of Sciences , a team of researchers has found numerous … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Expanding Virophage Diversity
… in  Microbiome , researchers from the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … an early version of the paper at the 2018 Viral EcoGenomics & Applications (VEGA) Symposium. The work also used … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Honey Bee Gut Microbiota Divvy Up Dinner
Scientists find bee gut microbes have a division of labor when it comes to metabolizing complex … Honey bees are invaluable pollinators — cupids of the plant world facilitating the remixing of genes in the … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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