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JGI Early Career Researchers Featured in mSystems Special Issue
In a special issue of mSystems , out May 14, 2019, JGI researchers are … Micro-Scale Applications head Rex Malmstrom and Metagenome Program head Emiley Eloe-Fadrosh outline more … processes. A third approach steps away from reconstructing genomes directly from the environment and focuses on …
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Dealing with Drought: Uncovering Sorghum’s Secrets
Over 40 percent of the cereal crop’s genes respond to drought stress. The Science Fields of drooping stalks and cracked earth are becoming common images in many … Laboratory, and the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
P. psychrophila genes drive resilience when salinity fluctuates. The Science The Arctic microalga … sequencing from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Triggering Morel Fruiting
A collaborative team led by Hao Tan from the Sichuan Academy of … Grigoriev from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … external source.  The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic information …
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You Can Move, But You Can’t Hide
Researchers at the JGI develop a tool to quickly and accurately identify … Lead Nikos Kyrpides at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at … Resource (IMG/VR) , now with more than 15 million viral genomes. It was also key to developing the first version of …
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Understanding Wildfire Recovery, Starting in Soil
A metagenomic look at the soil microbes present a year after a … to health, researchers have taken a look at microbial genomes across a spectrum of burned soils. By connecting … they reconstructed and examined over six hundred bacterial genomes — mainly actinobacteria, as well as proteobacteria, …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
Team develops a computational pipeline to sift and characterize RNA virus … Information, and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … RNA Polymerase (RdRP), necessary for replicating the RNA genome replication, detecting it has been a challenge. …
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Cataloging the Microbes that Manage the Health of River Systems
Database provides details on river microbes in 90% of US … Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the watersheds … National Laboratory. The JGI sequenced over 1,000 metagenomes and established standardized sequencing protocols so …
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The Surprising Structure of a Shrub Willow Sex Chromosome
A genetic architecture that is characteristic of the sex chromosomes … Laboratory and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … complete sex chromosomes. The results were published in  Genome Biology . The team found that the shrub willow’s W …
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Training the Next Generation of Talent
New Graduate Internship Program Builds Bridges Between DOE JGI, UC … his summer research at the U.S. Department of Energy Joint Genome Institute (DOE JGI), a DOE Office of Science user … DOE JGI that provide hands-on experience in cutting-edge genome research and apply experimental and computation tools …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … coherent pieces called contigs — into genes and even into genomes — from these environmental samples,” said Matthias …
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IMA genome-F18
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