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How Filamentous Fungi Sense Food
… researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … enriching the work being done as part of the 1000 Fungal Genomes Project. Funding for the project was also provided … US Department of Energy Contract DE-AC02-05CH11231, a Joint Genome Institute Community Science Program grant (CSP 982), …
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Streamlining Regulon Identification in Bacteria
… in Streptomyces coelicolor . The Impact As an integrative genome science user facility, connecting genes to functions … of the mission of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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JGI on the 2021 Highly Cited Researchers List
… team that combined field data with a reference switchgrass genome to associate climate adaptations with switchgrass … of webinars featuring aspects of the Integrated Microbial Genomes & Microbiomes (IMG/M) Nikos Kyrpides was part of an …
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IMA genome-F18
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… not occurring at that pace, right. And then, hopefully, 3-400 years down the road we’ll have a steady state where we … See you next time. … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Fungus Fuels Tree Growth
… partnered with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Program in order to get  M. elongata and  I. europaea  genomes sequenced and annotated for this study. The team … Support was also provided by the NSF Zygolife (NSF-DEB1441715), the United States National Science Foundation (NSF) …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist Simon Roux , who was … (ASM). Roux leads the Viral Genomics group within the JGI Metagenome Program, and coordinates the development of the virus …
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Rex Malmstrom
… genomics pipeline that provides JGI users access to the genomes of uncultured microbes.  His group also handles the Stable Isotope Probing (SIP) Metagenomics pipeline  that reveals in situ functional … Boston University ( magna cum laude ) … Serrano et al. 2024.  Spatial co-transcriptomics reveals discrete stages of …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… enabled by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … to  Euryarchaeota .  Finding Methane-Making Microbes with Metagenomics  By leveraging metagenomics to sample the entirety of a microbial community …
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Ray Turner Completes Last Tour of Lab Duty at JGI
… 15 years, Ray Turner has been one constant for the Joint Genome Institute. On July 1, 2020, that all changed. Ray’s … 15 years, Ray Turner has been one constant for the Joint Genome Institute. On July 1, 2020, that all changed. Ray’s … retired Naval Commander retires from Berkeley Lab. On June 24, in what was billed as a typical monthly JGI All-Hands …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… determination. Rhondene Wint, an alumna of the DOE Joint Genome Institute (JGI)-UC Merced internship program and … the factors and mechanics of gene expression in over 400 fungi species. “Fungi are the masters of adaptation,” … build proteins. What Wint and her mentors discovered in the genomes helped to reinforce Charles Darwin’s “survival of …
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Gene Expression: From On-Off Switch to Dial
… researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Force Office of Scientific Research under Award No. FA9550-14-1-0089, the Camille and Henry Dreyfus Foundation, and the … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is …
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