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… user capability between the JGI and Molecular Foundry for genome-encoded biomaterial discovery, design, and … into the red algae and eukaryotic evolution from the genome of Porphyra umbilicalis (Bangiophyceae, Rhodophyta). …

… Molecular Sciences Laboratory (EMSL) and the Joint Genome Institute (JGI) provide access to a variety of tools … 1. Q(uestion): How much DNA is required for the JGI SIP metagenomics pipeline? A(nswer):  The more the better. We want … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …

… a given BGC in various hosts, availability of sequenced genomes, and computing resources needed to predict BGCs from available genome sequences. The DOE Joint Genome Institute (JGI), a DOE Office of Science User …

… Metagenomic datasets could help map out microbial diversity … technologies have led to an abundance of microbial genomes becoming available to the global research … genes on nearly 2 million genomes, including isolates, metagenome-assembled genomes (MAGs) with varying quality …

… trichocarpa,  or the poplar tree, are potential biofuel feedstocks of interest to the U.S. Department of Energy … Laboratory and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … some songbird W chromosomes — suggest that they are advantageous enough to have evolved multiple times independently. …

… form of another species, so the scientists had to use the genome itself.   Approximately 67 million years ago, the ancestor to eelgrass underwent a whole genome duplication event, doubling all of its chromosomes.  … at a predictable rate, enabling researchers to use the genome assembly to calibrate their genetic clock.  Various …

… This is where the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … is famous for its work sequencing human and environmental genomes. But we now have these DNA synthesis capabilities … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …

… Grigoriev from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … data were generated, bioinformatic tools for binning metagenome data involved with mainly eukaryotic origins were … to re-visit the Olpidium genome data . Taking the advantage of rapid development of binning methods, we were able …

… yields by as much as 90 percent. As part of the DOE Joint Genome Institute’s  2016 Community Science Program portfolio … Research (INRA)  proposed sequencing a reference genome for  P. pachyrhizi to develop better strategies to … rust disease. Soybean itself is a  JGI Flagship plant genome , and JGI  published its genome sequence in 2010.     …

… to technical limitations and the sheer complexity of plant genomes. Now, with improvements to DNA Affinity Purification … paper and Technical Implementation Lead at the DOE Joint Genome Institute (JGI), a DOE Office of Science User … happening in terms of where those binding sites are in the genome — those sequences are moving around, disappearing and …

… new computational developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – Report on progress … experimental capabilities to analyze complex genomic or metagenomic datasets. [Download PDF] Q3 – Report on new …