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Triggering Morel Fruiting
Grigoriev from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … external source.  The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic information … fruiting bodies of morel in walk-in growth chambers in 1980s. Unfortunately, he died suddenly, and his patent has …
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Doubling Down on Known Protein Families
… of scientists at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … through the publicly available  Integrated Microbial Genomes & Microbiomes (IMG/M) database, they successfully … might those ‘unknown unknowns’ hold?  The team started with 8 billion metagenome genes from IMG (the study also …
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JGI User Executive Committee Expands
Committee (UEC) of the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User … different environments. He’s been involved in several plant genome projects through the Community Science Program. As a … encourage more plant proposals and provide feedback on pangenome tool development. Maurice is a fungal evolutionary …
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JGI Accepts 17 Proposals for Community Science Program
… (CSP) call of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … international collaboration that produced the reference genome sequence for Eucalyptus grandis. Accessing recently …
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Green Algae Reveal One mRNA Encodes Many Proteins
Laboratory, the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … the JGI and EMSL.  … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Tanja Woyke Elected to American Academy of Microbiology
American Academy of Microbiology (AAM) ! She is among the 68 new Fellows in the Class of 2020, selected from 118 … genetic material of uncultivated microbes and link their genomes to the roles they play in the environment. One … in Nature , applied single-cell sequencing to decode genomes of bacteria and archaea from previously understudied …
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Ancient Algae Reveal Secrets of Plant Evolution
Program of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Laboratory (Berkeley Lab), scientists sequenced the genomes of four  Zygnematophyceae algae, which were isolated … the United States Department of Agriculture (USDA) award (58-8042-9–089), the National Institutes of Health (NIH) …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… trace its origins, the researchers engaged the DOE Joint Genome Institute (JGI), with support of the US Department of … effort was to decode the complex Phytophthora ramorum genome. The JGI generated the organism’s DNA code in tandem … 2006 Sep 1;313(5791):1261-6. doi: 10.1126/science.1128796 Science News of the Day: Stokstad E. Genetics. Genomes …
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Cataloging the Microbes that Manage the Health of River Systems
Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the watersheds … National Laboratory. The JGI sequenced over 1,000 metagenomes and established standardized sequencing protocols so … Metatranscriptomic information was also generated. The 3.8 trillion bases or Terabases of sequencing data, along with …
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Busting the Unbreakable Lignin
… with researchers at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at … RNA sequencing and alignment to the reference fungal  genome . The study’s pivotal NMR (nuclear magnetic … Center (GLBRC, https://www.glbrc.org/) contract DE-SC0018409 (University of Wisconsin and Michigan State …
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The Surprising Structure of a Shrub Willow Sex Chromosome
Laboratory and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … complete sex chromosomes. The results were published in  Genome Biology . The team found that the shrub willow’s W … of Biodiversity Program (DEB-1542509 to S.D., DEB-1542486 to LBS, and DEB-1542599 to M.O.). Support was also …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
Proposals aim to sequence and annotate genomes from Antarctica to Africa to global oceans. Through … Program of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user … our efforts to characterize poorly-studied algal and viral genomes, and integrate with key DOE Office of Biological and …
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