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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… Stability Diagram — a tool within the Integrated Microbial Genomes and Microbiomes (IMG/M) platform — has been … protein annotations with ratios of DNA sequence fragments from the ecosystems. Selecting a protein identified from … predicted functional and metabolic roles across global metagenomes (within IMG).  The Impact The initial analysis …
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Expanding Horizons with the 2025 JGI-UC Merced Internship Cohort
… Interns contributed to a number of projects, from refining lab protocols at the bench to applying … undergraduate students and eight graduate students, hosted by 18 JGI staff. One of the mentors, postdoc Yumary Vasquez, … Asaf Salamov, Igor Grigoriev Project:  Training new JGI genomes with Tiberius Brandon Imstepf Mentor: Brian Bushnell …
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A chromosome‐scale reference genome of trifoliate orange (Poncirus trifoliata) provides insights into disease resistance, cold tolerance and genome evolution in Citrus
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Using DNA affinity purification sequencing (DAP-seq) to identify in vitro binding sites of potential Novosphingobium aromaticivorans DSM12444 transcription factors
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PhycoCosm Tutorial
… the largest interactive collection of sequenced algal genomes, omics data and comparative analysis tools developed by the Joint Genome Institute (JGI), a US Department of … Office of Science user facility at Berkeley Lab. Presented by Igor Grigoriev, Alan Kuo, Sara Calhoun and Richard Hayes. …
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DOE JGI Interns Share Their Summer Experiences
… This summer, the DOE JGI hosted 10 interns who came from a wide range of backgrounds. Many of them spent the … at UC Merced . CAMP is a statewide initiative funded by the National Science Foundation (NSF) and supports … summer were: Rida Ali, who worked with T.B.K. Reddy on the Genomes OnLine Database; Sarah Fruchart , who worked with …
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Genomic adaptations to an endolithic lifestyle in the coral-associated alga Ostreobium
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Leveraging single-cell genomics to expand the fungal tree of life
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Genomic insights into the uncultivated marine Zetaproteobacteria at Loihi Seamount
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Incorporating Genomics and Bioinformatics across the Life Sciences Curriculum
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The Impact of Genome Analyses on Our Understanding of Ammonia-Oxidizing Bacteria*
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The genome of Xylona heveae provides a window into fungal endophytism.
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