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JGI@25: A Single Cell, Myriad Microbial Discoveries
In honor of the JGI's 25th anniversary in 2022, we have revisited a … year, the JGI team reported the first closed and finished genome derived from an uncultured bacterial single cell – a … oil plume from Deepwater Horizon oil spill led to a draft genome of the first deep-sea, oil-eating bacterium from a …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
Understanding the shared genetic toolkit of ancestral and present-day plants The Science In a recent  … researchers focused on the full composition of genes, or pangenome, of the model plant  Marchantia polymorpha. Commonly … 35 major evolutionary plant lineages in the  Open Green Genomes Initiative , a project supported by the U.S. …
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The Power of One, Amplified
A preview of how large-scale single cell genomics complements … mobile genetic elements that were missed within paired metagenome assembled genomes (MAGs), and that dominant populations varied with …
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
As part of the JGI’s 25th anniversary celebration, the 2022 Annual … from its beginnings in the sequencing for the Human Genome Project out to the future of the institution. Their … very first project — the revolutionary work of the human genome project, which spanned nearly two decades, was filled …
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The molecular dimension of microbial species: 3. Comparative genomics of Synechococcus strains with different light responses and in situ diel transcription patterns of associated putative ecotypes in the Mushroom Spring microbial mat
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The complete mitochondrial genome of the conifer needle endophyte, Phialocephala scopiformis DAOMC 229536 confirms evolutionary division within the fungal Phialocephala fortinii s.l. – Acephala appalanata species complex
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High-quality draft genome sequence of Flavobacterium suncheonense GH29-5T (DSM 17707T) isolated from greenhouse soil in South Korea, and emended description of Flavobacterium suncheonense GH29-5T
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Complete genome sequence of the termite hindgut bacterium Spirochaeta coccoides type strain (SPN1T), reclassification in the genus Sphaerochaeta as Sphaerochaeta coccoides comb. nov. and emendations of the family Spirochaetaceae and the genus
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Draft genome sequences of Arthrobacter sp. AZCC_0090 and Mycobacterium sp. AZCC_0083 isolated from oligotrophic subsurface forest soil in the Santa Catalina mountains of Southern Arizona
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JGI & KBase at PAG XXVII
The Plant and Animal Genome XXVII Conference (PAG) takes place January 12-16, … in San Diego, Calif. Representatives from the DOE Joint Genome Institute (JGI) and the  DOE Systems Biology … your plant genomics research. Click here to download a list of talks relevant to JGI science at PAG XXVII. On January …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… a microbial mat. The Science In microbial mats, communities of microorganisms live among viruses that infect them. But … lysogeny, they can insinuate themselves inside the host’s genome, living quietly and replicating with their host … researcher at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Tracing the Evolution of Shiitake Mushrooms
New genomes highlight the diversity of white rot fungi in the genus Lentinula   The Science … around the world. By complete sequencing of 24 new mushroom genomes, and assembling genomes from 60 existing sequences, …
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