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Complete genome sequence of the thermophilic, hydrogen-oxidizing Bacillus tusciae type strain (T2T) and reclassification in the new genus, Kyrpidia gen. nov. as Kyrpidia tusciae comb. nov. and emendation of the family Alicyclobacillaceae da Costa and
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Complete genome sequence of Planctomyces brasiliensis type strain (DSM 5305T), phylogenomic analysis and reclassification of Planctomycetes including the descriptions of Gimesia gen. nov., Planctopirus gen. nov. and Rubinisphaera gen. nov. and emended
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JGI at the AGU Fall Meeting
This year the AGU Fall Meeting, with the theme “Science is Society,” hosts sessions in … Register for the meeting here. Here are some sessions of interest (all times in PST unless otherwise noted): … context for thousands of newly sampled microbial genomes from North American watersheds (Invited)” 4pm CST …
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Genome sequences of key bacterial symbionts of entomopathogenic nematodes: Xenorhabdus cabanillasii DSM17905, Xenorhabdus ehlersii DSM16337, Xenorhabdus japonica DSM16522, Xenorhabdus koppenhoeferii DSM18168, and Xenorhabdus mauleonii DSM17908
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
Researchers looked across many organisms to see that aminotransferase enzymes have evolved mix-and-match … characteristics — creating many different ways of processing nitrogen. To boost crops more efficiently in … of these enzymes across 90 species. They queried the genomes of 15 species from each of six kingdoms: eubacteria, …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
New 5-year strategic plan outlines how the JGI will advance the bioeconomy, leveraging … for the global research community. The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) has released … the bioeconomy. Functional diversity theme. Reading the genomes of individual organisms or environmental DNA, and …
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Tina Clarke
Ms. Clarke joined the Lab in 2007 as the Sr. Human Resources Division Partner for the … Sonoma State University. Early on Tina knew the importance of understanding human and group behaviors as her role in HR …
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JGI-UC Merced Interns Share Their 2021 Experiences
During the summer of 2021, 13 interns from UC Merced spent eight weeks working virtually … Evaluation of Binning Tools for Microbial Eukaryotes in Metagenomes … Functional exploration of Phage Impact on …
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Simon Roux
Dr. Roux joined the JGI in 2017 to lead viral genomics research as part … the quality and completeness of metagenome-assembled viral genomes. Nature biotechnology 39, 578-585. Roux et al., … Microbiology Resource Announcements … Education … Selected Publications … Awards and Honors …
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Zhong Wang
Research in the Analysis R&D group focuses on developing new bioinformatics solutions to support JGI in adopting … and enabling data-driven science. This is a group of computational biologists, bioinformaticians, computer … metagenome binning software … Education … Selected Publications … Software …
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Benjamin Cole
Dr. Cole is interested in studying how plants interact with their environment. … (scRNA-seq, Spatial Transcriptomics). … University of California, San Diego (PhD, 2011) Rensselaer Polytechnic … of Cell Identity as an R package … Education … Selected Publications … Software …
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Hiroshi Otani
Since joining the DOE Joint Genome Institute in 2016, Dr. Otani has … technologies and methodologies that facilitate discovery of new secondary metabolites. Prior to joining the JGI, he … Mol. Microbiol. 87, 1223-1236. PubMed … Education … Publications …
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