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Complete genome sequence of Planctomyces brasiliensis type strain (DSM 5305T), phylogenomic analysis and reclassification of Planctomycetes including the descriptions of Gimesia gen. nov., Planctopirus gen. nov. and Rubinisphaera gen. nov. and emended
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JGI Workshops at 33rd Fungal Genetics Conference
… Friday, March 20: JGI-EMSL Workshop: "Toward 10,000 Fungal Genomes and Phenotypes" …
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You Can Move, But You Can’t Hide
… Resource (IMG/VR) , now with more than 15 million viral genomes. It was also key to developing the first version of … , which currently has more than 700,000 plasmids from genomes, metagenomes and metatranscriptomes. To lower barriers to …
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MycoCosm Tutorial
… more about MycoCosm, a data portal with over 2,000 fungal genomes and multi-omics datasets, equipped with interactive …
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Ancient Algae Reveal Secrets of Plant Evolution
… Laboratory (Berkeley Lab), scientists sequenced the genomes of four  Zygnematophyceae algae, which were isolated … in improving plant resilience and productivity. The algal genomes sequences are available on the JGI’s  PhycoCosm …
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JGIota: A Tool to Find the Nomadic Genes that Help Microbes Adapt - geNomad
… software that finds plasmids and viruses within microbial genomes. As mobile genetic elements like viruses spread …
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Genome sequences of key bacterial symbionts of entomopathogenic nematodes: Xenorhabdus cabanillasii DSM17905, Xenorhabdus ehlersii DSM16337, Xenorhabdus japonica DSM16522, Xenorhabdus koppenhoeferii DSM18168, and Xenorhabdus mauleonii DSM17908
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Filling in the Plant Tree of Life
… food, medicine, and bioenergy crops. But most available genomes are from narrow swaths of the plant tree of life. …
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IMG/VR
… the latest release of IMG database dedicated to viral genomes assembled from metagenomes. He also demonstrates briefly how to leverage novel …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… bioenergy and biomanufacturing. The JGI Algal Program makes genomes and multi-omics data from JGI CSP projects publicly …
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Mining Metagenomes for Cas Proteins
… possible by mining the datasets in the Integrated Microbial Genomes and Microbiomes (IMG/M) suite of tools managed by … Institute. The Impact The ability to accurately edit genomes (that is, repair gene mutations, and either delete …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… build proteins. What Wint and her mentors discovered in the genomes helped to reinforce Charles Darwin’s “survival of … at the JGI. Previous studies were conducted on one or few genomes, but Wint’s research expands the understanding of hundreds of fungal genomes covering the entire kingdom of fungi. “The …
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