Results

Draft genome sequences of Butyrivibrio hungatei DSM 14810 (JK 615T) and Butyrivibrio fibrisolvens DSM 3071 (D1T).
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Conserved unique peptide patterns (CUPP) online platform 2.0: implementation of +1000 JGI fungal genomes.
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Codon bias, nucleotide selection, and genome size predict in situ bacterial growth rate and transcription in rewetted soil
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Expanded genome and proteome reallocation in a novel, robust Bacillus coagulans strain capable of utilizing pentose and hexose sugars
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Characterisation and comparative analysis of mitochondrial genomes of false, yellow, black and blushing morels provide insights on their structure and evolution
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Draft genome sequence of Mesonia hippocampi DSM 29568T isolated from the brood pouch of a diseased male seahorse.
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Whole genome sequence, CAZyme repertoire and sugar metabolic model of the phytopathogenic fungus Kretzschmaria zonata GFP 132
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A Chromosome-Scale Genome Assembly of the Flax Rust Fungus Reveals the Two Unusually Large Effector Proteins, AvrM3 and AvrN.
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Iron-rich Microbial Mats’ Main Players: Marsarchaeota
… conditions. The Science Through a combination of sequencing tools and techniques applied to samples collected from … the JGI’s Community Science Program , the team used metagenome assemblies, transcriptomes and single amplified genomes from samples collected from several locations to …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
… to make sure the goals, experimental design, and plan for data utilization are clear. Contact JGI staff for feedback … a proposal. Describe in detail what you will do with the data! Ideally, you or someone on your team will have … exploring how KBase (www.kbase.us) can support biological data analysis. It is a free, open source analytics platform …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… scientist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … and analyze the single nuclei and spatial transcriptomics data this work leverages.   These experiments focused on two … hair. At such resolution, this spatial transcriptomics data captured molecular information from both plant cells …
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Streamlining Regulon Identification in Bacteria
… in Streptomyces coelicolor . The Impact As an integrative genome science user facility, connecting genes to functions … environments are expressed when their functions are needed. Data yielded through RIViT-seq expand the known … S. coelicolor . With results from the research, RIViT-seq data have increased the identification of the number of …
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