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Phylogenomic synteny reveals paleohexaploid-derived genomic blocks across Asteraceae
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Aerobic sister lineage of breviates has gene-rich mitochondrial genomes
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A Single Genomic Region Controls Primocane Fruiting in Tetraploid Blackberry
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The reference genome for the northeastern Pacific bull kelp, Nereocystis luetkeana
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Advances and challenges in understanding evolution through genome comparison: meeting report of the European Molecular Biology Organization (EMBO) lecture course “Evolutionary and Comparative Genomics”
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Susannah Tringe Named 2020 DOE Lawrence Award Recipient
… Tringe, a microbiologist, was recognized for “advances in sequence-based studies of microbial assemblies, revealing the roles of microbial communities in carbon cycling, in interactions …
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You Can Move, But You Can’t Hide
… MGEs based upon their gene content and their genetic sequences. The software was created by researchers under the … Lead Nikos Kyrpides at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at … in soils and water. MGEs like viruses and plasmids drive microbial processes and evolution. This is because MGEs can …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… from environmental samples — to identify over 27,000 microbial genes. These genes were identified based on their … coherent pieces called contigs — into genes and even into genomes — from these environmental samples,” said Matthias … of rumen-digested switchgrass, researchers isolated and sequenced DNA from rumen microbes involved in the digestion …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… trace its origins, the researchers engaged the DOE Joint Genome Institute (JGI), with support of the US Department of … effort was to decode the complex Phytophthora ramorum genome. The JGI generated the organism’s DNA code in tandem … of millions of trees in California alone. With the genome sequence in hand, the UC team led the charge to develop …
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JGI at the AGU Fall Meeting
… on Intensive Agricultural Lands Changes Nitrogen Cycling Microbial Communities and Reduces N2O Production Potential … A finely tuned, time-resolved analysis of viral and microbial communities in the Erpe river” 8:30am Convention … context for thousands of newly sampled microbial genomes from North American watersheds (Invited)” 4pm CST …
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Honey Bee Gut Microbiota Divvy Up Dinner
… But scientists have wondered exactly how the microbial community carries out its helpful metabolism: … including collecting and analyzing the honey bee gut metagenome, which was done with the help of the US Department of Energy Joint Genome Institute.     … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Whole metagenome sequencing and 16S rRNA gene amplicon analyses reveal the complex microbiome responsible for the success of enhanced in-situ reductive dechlorination (ERD) of a tetrachloroethene-contaminated Superfund site
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