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Taking Stock of the Known and Unknown Microbial Space
… to the global research community.  Published January 17, 2025 in Science Advances , researchers at the U.S. … what is still unknown.  “We took a deep dive into over 1.8 million bacterial and archaeal genomes to see how much … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Katherine Louie
Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 became Platform Lead where she manages metabolomics … in situ kinetic histochemistry. Sci Rep. 2013;3: 1656. … Education … Selected Publications …
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Tina Clarke
Partner for the Joint BioEnergy Institute (JBEI) and in 2017 joined the Joint Genome Institute (JGI). Tina serves in … Compensation Analyst and Human Resources Partner, June 2017 –  present Sr. Compensation Analyst, May 2015 –  present … TriNet VCO, San Leandro, CA HR Generalist  1997 – 1999 … Education … Experience …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… hills, and it has legacy mining that goes back more than 100 years. And in particular, there’s an inflow from the … you know, within my lifetime, we should hit around nine or 10, which is thought to be where we’re going to level off. … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Enlarging Windows into Understanding Gene Functions
Technologies Group. In an article published November 25, 2021 in Nature Methods , JGI researchers led by co-first … their functional interpretation is as tough as it has been 10 years ago,” he said. “We thought about reconstructing … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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When “The Blob” Made It Hotter Under the Water
… as hurricanes and droughts. Another one began in late 2013, when a large patch of warm ocean water about a third the … which go from coastal to open ocean waters. Between 2010 and 2016, Hallam and his colleagues collected more than 270 water …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Evolution of a Fungal Gene Expression Regulator
… least one reference genome for every family of fungi, the 1000 Fungal Genomes initiative of the U.S. Department of … technologies for producing both reference genomes and epigenomics, researchers are unwrapping complex mechanisms of … Advanced Computing Resource Center (GACRC) and Georgia Genomics and Bioinformatics Core (GGBC) at the University of …
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JGI Announces 2025 New Investigator Portfolio
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Forming Scientific Connections and Building Community
The 11th cohort of JGI-UC Merced interns pick highlights from … Malmstrom, Nandita Nath & W. Berkeley Kauffman Project: “ 16s Sequencing of Barcoded Microbial Genomes ” Morgan …
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Tracing the Evolution of Shiitake Mushrooms
… atmospheric carbon dioxide.  Summary Researchers sequenced 11 samples from Asia–Australasia and 13 samples from the Americas to trace the evolution …
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Cultivating Symbiotic Antarctic Microbes
… to that of a free-living organism. First discovered in 2011, Nanohaloarchaea are part of the DPANN (Diapherotrites, … outlined by JGI scientists and their collaborators in 2013. While most DPANN lineages are predicted symbionts, the …
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