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Draft genome assembly and annotation of Haematococcus lacustris strain Liv1, an industrial astaxanthin-producing microalga
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The genomic footprints of wild Saccharum species trace domestication, diversification, and modern breeding of sugarcane
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New Research Sheds Light on Diversity in the Deep Sea
… Scientists with the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at … contributed metagenomic sequencing to the study as well as  genome analysis, providing authors a more complete picture … datasets are available on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) portal. The study,  published …
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Secreted Effector Proteins of the Poplar Leaf Spot and Stem Canker Pathogen Sphaerulina musiva Manipulate Plant Immunity and Contribute to Virulence in Diverse Ways.
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… that allows researchers to quickly modify diverse bacterial genomes. In 2019, the JGI’s Yasuo Yoshikuni and his team  … of DNA (up to 60 kb) in a single step, directly into the genome. “CRAGE is central to our ability to offer … domesticate some 60 strains, inserting into them a genetic sequence that acts as a “landing pad.” Mouncey adds, “Once …
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Dissecting the dominant hot spring microbial populations based on community-wide sampling at single-cell genomic resolution
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Genomic and functional analyses of fungal and bacterial consortia that enable lignocellulose breakdown in goat gut microbiomes
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Gradual polyploid genome evolution revealed by pan-genomic analysis of Brachypodium hybridum and its diploid progenitors
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Genome expansion by allopolyploidization in the fungal strain Coniochaeta 2T2.1 and its exceptional lignocellulolytic machinery
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Genus-Wide Assessment of Lignocellulose Utilization in the Extremely Thermophilic Genus Caldicellulosiruptor by Genomic, Pangenomic, and Metagenomic Analyses
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MaxBin: an automated binning method to recover individual genomes from metagenomes using an expectation-maximization algorithm
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Population genomics provides insights into the genetic basis of adaptive evolution in the mushroom-forming fungus Lentinula edodes
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