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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
… Puerto Nuevo is a small town along the Baja California coastline in Mexico. While … UC Merced graduate student Sabah Ul-Hasan and alumnus of the JGI-UC Merced Genomics Internship Program, first … Dr. Ben Cole and Dr. Axel Visel led to being co-advised by Dr. Tanja Woyke and additionally mentored by members of …
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Tanja Woyke
… After studying the mechanism of action of antifungal natural products and their derivatives during … at the DOE Joint Genome Institute in 2004. The main object of her research was the symbiont community of a gutless … is the Microbial Science Program Head as well as our Deputy of User Programs. Click to learn more about the program's …
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JGI Scientists Pen Genome Watch Articles
… more to come in 2020. Researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … are sharing their expertise in environmental genomics by writing for the column Genome Watch in  Nature Reviews … half of the 2019 Genome Watch articles as a way to expose readers to a broader genomics perspective. Woyke spread the …
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Honey Bee Gut Microbiota Divvy Up Dinner
… Scientists find bee gut microbes have a division of labor when it comes to metabolizing complex … that pollen’s pectin and hemicellulose are degraded mainly by just two clades:  Gilliamella,  which mostly resides in … — the pectin and hemicellulose — are digested further along: first, the pectin, mainly by  Gilliamella ; then the …
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Tracking the Origins of Methane-Producing Microbes
… archaea are estimated to produce 500 million tons of methane a year, which is over half the total global … The archaeal genome was detected in samples collected by Stephen Quake’s team at Yellowstone National Park’s … led us to conclude that our new methanogen did not belong to the Euryarchaeota, the archaeal “superphylum” where …
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A Redesign for Yeast’s Genome, Chromosome by Chromosome
… international collaboration, with some artistic endeavors along the way. Eventually, the goal is to create an entirely …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… proposal call is open year-round, but proposals submitted by July 30 will be included in the next review. “So webinars … really fully exist back then,” said Hal Alper, a University of Texas at Austin professor, “but we really first heard about the JGI synthesis …
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The JGI Data Portal: Improving User Experience
… from the other JGI Portals, as well. “For thousands of scientists around the world, the JGI Genome Portal is a critical resource — it provides access to all of JGI’s genomic databases and tools,” noted  Kjiersten … Over its 23-year history, JGI has produced more than 13 petabytes of data, accessible through the Genome Portal. “The …
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What Happens To a Rainforest When You Dial Up Drought?
… Rainforests store a big fraction of all the carbon on Earth, and soil microbes play a key role in pulling that carbon out of the atmosphere. This episode, researchers take a look at … to that storage when a rainforest hits a drought. Tag along with their experiments in a fully enclosed, human-made …
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JGI User Executive Committee Expands
… have been elected to the User Executive Committee (UEC) of the U.S. Department of Energy Joint Genome Institute … Merced, and Kevin Solomon of the University of Delaware. Along with the existing UEC members, their areas of study … On the UEC she intends to represent the user community by providing input on JGI policies and capabilities that …
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The Expanding Universe of Methane Metabolisms in Archaea
… gas 20 times more potent than carbon dioxide. Billions of years ago, methane-producing archaea likely played a key … Microbial Genomes & Microbiomes (IMG/M) database maintained by the U.S. Department of Energy (DOE) Joint Genome … which in turn can help to understand its impact on climate along earth history.” Marker genes for diverse methane …
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Graduate Students Get Thesis Research Opportunity at the JGI
… Twice a year, the DOE Office of Science Graduate Student Research (SCGSR) program awards … and I hope that this open-source platform will be utilized by researchers from a variety of disciplines who seek to … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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