Results

Zhong Wang
Research in the Analysis R&D group focuses on developing new … and enabling data-driven science. This is a group of computational biologists, bioinformaticians, computer … metagenome binning software … Education … Selected Publications … Software …
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Genome sequence of the thermophilic fresh-water bacterium Spirochaeta caldaria type strain (H1T), reclassification of Spirochaeta caldaria, Spirochaeta stenostrepta and Spirochaeta zuelzerae in the genus Treponema as Treponema caldaria comb. nov.,
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W. Berkeley Kauffman
Berkeley is responsible for receiving and processing user samples. His R&D work focuses on the development of new applications utilizing a variety of technologies to improve the JGI’s capabilities in the areas of metagenomics, single-particle genomics, and metabolic …
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Building Sphagnum Genomic Resources
Sphagnome data would enable researchers’ insights on their potential carbon cycling impact.   The … Science Program (CSP), researchers are developing a number of resources to build up Sphagnum as a plant model system focused on carbon cycling studies, rather …
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Complete genome sequence of the thermophilic, hydrogen-oxidizing Bacillus tusciae type strain (T2T) and reclassification in the new genus, Kyrpidia gen. nov. as Kyrpidia tusciae comb. nov. and emendation of the family Alicyclobacillaceae da Costa and
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Complete genome sequence of Planctomyces brasiliensis type strain (DSM 5305T), phylogenomic analysis and reclassification of Planctomycetes including the descriptions of Gimesia gen. nov., Planctopirus gen. nov. and Rubinisphaera gen. nov. and emended
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Genome sequences of key bacterial symbionts of entomopathogenic nematodes: Xenorhabdus cabanillasii DSM17905, Xenorhabdus ehlersii DSM16337, Xenorhabdus japonica DSM16522, Xenorhabdus koppenhoeferii DSM18168, and Xenorhabdus mauleonii DSM17908
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JGI & KBase at PAG XXVII
The Plant and Animal Genome XXVII Conference (PAG) takes place January 12-16, 2019, in San Diego, Calif. Representatives from the DOE Joint … your plant genomics research. Click here to download a list of talks relevant to JGI science at PAG XXVII. On January …
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Making a Lichen Together
For the first time, a team analyzes the transcriptomes of a lichen fungus and alga to … the Duke Institute of Genomic Sciences and Policy (for DNA sequencing and assembly); by a three-year subcontract to DA, …
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Trent Northen
… to link genomes with environments to understand how webs of microbes cycle carbon and sustain biomes via the … Schadt, C., Martin, S., Carrell, A. et al. An integrated metagenomic, metabolomic and transcriptomic survey of … … Metabolomics Science Program … Education … Selected Publications … Awards and Honors …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
Science The Arctic microalga Plocamiomonas psychrophila can thrive in changing conditions. A recent study shows that … ice in the Arctic has decreased by more than 30% in terms of quantity and thickness. Replacing older, thicker ice with … This was facilitated in part by RNA library preparation and sequencing from the U.S. Department of Energy (DOE) Joint …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both Earth and DNA are close to … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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