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Marine Microbe Contains Multitudes
… Now, a recent study published in Microbiome has uncovered that SAR324 encompasses four subgroups, adapted to different … of SAR324 cells and their gene expression, the team then sequenced community genomes and expressed gene transcripts … ecotypes because, historically, they have used the sequence of a “marker gene,” namely the 16S ribosomal RNA …
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Improving the Cacao Genome and Phytozome
… due to climate change and devastating fungal infections. That’s why Mars, Inc., a maker of chocolate for more than 100 years … through the Cacao Genome Database project. The genome sequence was assembled by the plant team at the  HudsonAlpha … high-throughput sequencing and computational analysis that enable systems-based scientific approaches to these …
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
… The Sequence to Function: Applications and Analysis for the …
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Accelerating Metagenomics Discoveries with Deep Learning
… of proteins in order to conduct more efficient protein sequence alignments. He also aims to detect structural similarities in proteins that low sequence identity may belie. The technology he’s … Deep learning algorithms can vectorize faces… … so, why not proteins?         …
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Ecophysiology of Freshwater Verrucomicrobia Inferred from Metagenome-Assembled Genomes
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Diversity, distribution, and expression of opsin genes in freshwater lakes
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Two decades of bacterial ecology and evolution in a freshwater lake
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Changes to virus taxonomy, the international code of virus classification and nomenclature, and the ICTV statutes ratified by the International Committee on Taxonomy of Viruses (2025)
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Virus species names have been standardized; virus names remain unchanged
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DNA Synthesis Program
… with U.S. and international scientists to drive innovations that align with DOE's missions. … functional genomics, focusing on developing genetic systems that can address global energy and environmental challenges. … Program aims to generate large datasets to explore sequence-function relationships, advancing the discovery of …
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Genome Streamlining, Proteorhodopsin, and Organic Nitrogen Metabolism in Freshwater Nitrifiers
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Uncovering the Diversity and Activity of Methylotrophic Methanogens in Freshwater Wetland Soils
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