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Defining a Pan-Genome for Antarctic Archaea
… Analysis of haloarchaeal metagenomes broadens understanding of … Impact By collecting and sequencing dominant haloarchaeal sequences from six hypersaline lakes, researchers focused on … the haloarchaea that thrive in the very salty waters of Deep Lake to better understand how they’ve adapted to these …
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Viruses interact with hosts that span distantly related microbial domains in dense hydrothermal mats
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Polar Phytoplankton Need Zinc to Cope with the Cold
… Antarctic algae need their vitamins; zinc fuels some of their most important functions. Even in the chilly waters … looking at how communities of these microalgae interact, researchers have found that polar algae rely on dissolved zinc … collaboration, in 2017, they published the first genome sequence of a cold-adapted microalga: the diatom …
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Learning to Look
… “Where’s Waldo?” readers need to look for a number of distinguishing features. Several characters may be … and a unique chronic infection cycle. “We’re not sure why we systematically manage to miss them; maybe it’s due to … first worked on a reference dataset that included genome sequences known to be affiliated with the Inoviridae. “What …
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Alabama Agricultural & Mechanical University Internship Program
… 2024 was a year of firsts, including the flagship internship program between … their mentors and fellow interns. Inspired by the success of the UC Merced internship program, they left the JGI more …
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A More Intuitive Phytozome Interface
… Highlighting the latest interactive version of the JGI’s plant data portal. On August 6, 2021,  version … Questions about the transition from Phytozome v12 to v13. Why is it necessary to retire Phytozome v12? The codebase … preset for the gene in question, so you can download sequences, annotations, and gene structures. These genomes’ …
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JGIota: The Algae Nicknamed ‘Chlamy’
… UC Berkeley plant biologist Sabeeha Merchant explains why she works on this alga, how researchers managed to sequence its genome, and what it has to teach us about other … in the Environmental Genomics & Systems Biology Division of the Berkeley Lab Biosciences Area.] …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… Survey of Setaria's natural diversity reveals seed dispersal in … first time. For years, Elizabeth (Toby) Kellogg and other researchers at the Danforth Plant Science Center (Danforth … National Laboratory (Berkeley Lab), generated genome sequences for nearly 600 green millet plants and released a …
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JGI Portals
… expertise and infrastructure enable a broad community of scientists and engineers to leverage our data to develop new algorithms, models and tools in support of DOE mission priorities. Data discoverability and … the JGI will move to a new login service, requiring the use of an ORCID account with two-factor authentication enabled …
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User Programs
… and analysis will be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of … ONGOING CLOSED Who Should Apply? Investigators with research projects that integrate the expertise and …
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JGI@25: Strengthening Soybean
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … impressive environmental and energy advantages explain why soybean is a flagship genome of the JGI’s Plant Program. … first legume species with a published complete draft genome sequence. At the time, the vital global source of both …
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DNA Synthesis Program
… The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, advancing the development of … energy and environmental challenges. Through innovative research in synthetic biology, the program enables the design …
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