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Nitrogen cycling microbiomes are structured by plant mycorrhizal associations with consequences for nitrogen oxide fluxes in forests
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Tracking the roots of cellulase hyperproduction by the fungus Trichoderma reesei using massively parallel DNA sequencing
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Arabidopsis Root Microbiome Microfluidic (ARMM) Device for Imaging Bacterial Colonization and Morphogenesis of Arabidopsis Roots
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The fungus that made itself at home
… from similar organisms, researchers have gained insights on why the dry rot ( Serpula lacrymans ) is so destructive in … the brown rot Serpula lacrymans towards breaking down plant mass for conversion to sustainable, alternative … Serpula species, S. himantioides from Europe, that was sequenced and analyzed by the JGI. The researchers found …
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Cultivating the Bacterial Microbiota of Populus Roots
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Variation in Adult Plant Phenotypes and Partitioning among Seed and Stem-Borne Roots across Brachypodium distachyon Accessions to Exploit in Breeding Cereals for Well-Watered and Drought Environments  
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Alabama A&M Interns Access An Abundance of Knowledge
… Vogel on researching the effects of Brachypodium distachyon plant root exudates on the plant microbiome. They also took part in many enriching …
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Two deeply conserved non-coding sequences control PLETHORA1/2 expression and coordinate embryo and root development
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Genomics of wood-degrading fungi
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Metabolic Modeling of Fungi
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JGI@25: The Little Alga That Could
… evolutionary history. Retaining ancestral features of both plant and animal cells, it shares nearly 7,000 genes with … Its genome also contains hundreds of genes uniquely associated with carbon dioxide capture and the generation of … sustainable biofuel production. The JGI published a partial sequence of Chlamydomonas reinhardtii in 2003; then in 2007 …
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Large-scale genome sequencing of mycorrhizal fungi provides insights into the early evolution of symbiotic traits
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