Results

Whole-Genome rVISTA: a tool to determine enrichment of transcription factor binding sites in gene promoters from transcriptomic data
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Transcriptome analysis of Brachypodium during fungal pathogen infection reveals both shared and distinct defense responses with wheat
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Comprehensive genomic and transcriptomic analysis of polycyclic aromatic hydrocarbon degradation by a mycoremediation fungus, Dentipellis sp. KUC8613
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Genome, transcriptome, and secretome analysis of wood decay fungus Postia placenta supports unique mechanisms of lignocellulose conversion
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Comparative analysis of the transcriptomes of Populus trichocarpa and Arabidopsis thaliana suggests extensive evolution of gene expression regulation in angiosperms
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A multi-omic survey of black cottonwood tissues highlights coordinated transcriptomic and metabolomic mechanisms for plant adaptation to phosphorus deficiency
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Horizontal gene transfer of the Mer operon is associated with large effects on the transcriptome and increased tolerance to mercury in nitrogen-fixing bacteria
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JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom
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Construction of a medicinal leech transcriptome database and its application to the identification of leech homologs of neural and innate immune genes
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Partnerships Development Team
Developed in 2017, the PDT was established in part to help better-connect … improving sustainable soil management practices. … In June 2020, the Department of Energy announced the  2020 TCF …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… power of plants, and the lessons they can teach us, are why the U.S. Department of Energy (DOE) Joint Genome … richardii marks the first published manuscript of a genome sequence generated through the OGG. For a long time, C-fern … a chromosomal genome assembly and associated methylome, transcriptome and metabolome analyses for C-fern that was …
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
Every year, the JGI sequences around 35,000 samples — from plants, algae, …
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