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In marine Bacteroidetes the bulk of glycan degradation during algae blooms is mediated by few clades using a restricted set of genes
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Programs & Platform Leads
As an Integrative Genome Science User Facility, the JGI plays a leadership role in enabling the frontiers of research related to DOE’s missions in …
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Comparative genomics reveals insights into characterization and distribution of quorum sensing-related genes in Shewanella algae from marine environment and clinical sources
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High‐throughput identification of novel heat tolerance genes via genome‐wide pooled mutant screens in the model green alga Chlamydomonas reinhardtii
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… planet’s microbial diversity is immense, yet much of it remains unknown. For more than a decade, researchers around the … of Bacteria and Archaea (GEBA) initiative. “This project has helped to define the current shape of the … of genomic DNA at DSMZ for GEBA-Actino and similar projects.       … The U.S. Department of Energy Joint Genome …
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Plant Program
With collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address global … gene function research. The  Open Green Genomes (OGG) project seeks to develop comparative high quality genomes …
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A Natural Mechanism Can Turbocharge Viral Evolution
Understanding how a fundamental mechanism of evolution allows microbes … might then harness them as molecular tools for research and industry applications. Summary In their recently published … (DP150100244) and the Australian Antarctic Science program (project 4031). The work in the Hallam Lab was performed …
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An Integrated Dataset to Understand Ecosystem Interaction
… yields a comprehensive tree and soil dataset for understanding the dynamic relationship between poplar trees and their … (LANL), and DE-AC05-76RL01830 (PNNL). … BioScales project on JGI Genomes Online Database … BioScales project on National Microbiome Data Collective … …
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Virus-Microbe Interactions of Mud Island Mangroves
…   Later this year, Ian Rambo, a graduate student in Brett Baker’s lab at the University of Texas at Austin, … wetlands in south Texas,” he explained. “In terms of my project, I wanted to incorporate that CSP, but also look at … to academia, and saw great potential in the academic and industry collaborations taking place. I am planning to enter …
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Cataloging the Microbes that Manage the Health of River Systems
Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent … anything. The collaborative consortium behind the GROWdb project demonstrates not only how researchers can … … Cataloging the Microbiome of U.S. Rivers … GROWdb pilot project … GROWdb public narrative … From our partners … From …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
In this short video, UC Merced undergraduate and graduate … but now I think I can lead a team. So maybe I go to industry field, I lead a research team. I think, yeah, … enough experience to make really good contributions to the project. Also my area of expertise over the past couple …
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JGI Scientists Pen Genome Watch Articles
Tanja Woyke and other JGI researchers made their debut writing for the Nature Reviews Microbiology column last year — … would JGI researchers consider regularly writing for the magazine’s column Genome Watch? The column appears in six … As such, JGI is involved in a broad variety of genomics projects that relate to energy and the environment.” she …
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