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Genomic Encyclopedia of Type Strains, Phase I: The one thousand microbial genomes (KMG-I) project
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The Genomes OnLine Database (GOLD) v.4: status of genomic and metagenomic projects and their associated metadata
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Supporting community annotation and user collaboration in the integrated microbial genomes (IMG) system
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Genomic Methods and Microbiological Technologies for Profiling Novel and Extreme Environments for the Extreme Microbiome Project (XMP).
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The Biota Project: A Case Study of a Multimedia, Grassroots Approach to Scientific Communication for Engaging Diverse Audiences.
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Identifying Aspects of the Post-Transcriptional Program Governing the Proteome of the Green Alga Micromonas pusilla
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How Filamentous Fungi Sense Food
… the order in which this fungus breaks down plant cell wall materials including lignin, cellulose and hemicellulose. The … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … proposal akin to the Encyclopedia of DNA Elements (ENCODE) project, which is aimed at determining the activity, …
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Enlarging Windows into Understanding Gene Functions
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … Program (CSP) focuses on a fungal comparative ENCODE project known as FUNCODE. “We noticed a few years ago that … species to answer questions about how they break down plant materials, which could be useful for industrial biofuel …
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JGI@25: Studying Sorghum’s Survival Skills
… strengths into other plants. A brief timeline of sorghum projects at the JGI: 2009: JGI and collaborators use … genome and releases it to the community. 2014: GENCODE project begins. To support growing sorghum and other C4 … to compare different varieties of sorghum. Initially, the project looks at how each variety stores sugars and …
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Coming-of-Age Characterization of Soil Viruses: A User’s Guide to Virus Isolation, Detection within Metagenomes, and Viromics
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The Genomes OnLine Database (GOLD) v.5: a metadata management system based on a four level (meta)genome project classification
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Cataloging the Microbes that Manage the Health of River Systems
… anything. The collaborative consortium behind the GROWdb project demonstrates not only how researchers can successfully partner with DOE user facilities and resources on such large-scale multi-omic … JGI (https://ror.org/04xm1d337), a DOE Office of Science User Facility, is supported by the Office of Science of the …
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