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Clarence Le
… researcher who identifies and analyzes novel clades of RNA viruses and determines novel viral gene functions that may impact hosts and host …
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Plant Program
… to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, … and bolster agricultural resilience. The program’s discoveries support a plant based bioeconomy where plants are a major source of chemical production and contribute to a healthier planet …
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Secondary Metabolites Program
Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and … advantages to the organisms producing them, and are often involved in defense, nutrient acquisition and … clusters (BGCs) being expressed. The program works to uncover these hidden biochemical resources by exploring the …
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efam: an expanded, metaproteome-supported HMM profile database of viral protein families.
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Propagation of viral genomes by replicating ammonia-oxidising archaea during soil nitrification
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Homoeolog expression divergence contributes to time of day changes in transcriptomic and glucosinolate responses to prolonged water limitation in Brassica napus
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The Megadata of Lake Mendota - Part 1: Many, Many Mers
Lake Mendota sits right next to the University of Wisconsin, Madison. And Trina McMahon's lab has been sampling the microbes of that lake for over 20 years, to understand how the freshwater ecosystem … together.  The next 3 episodes are the story behind that giant assembly from Lake Mendota. In this episode: the …
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VEGA Symposium
Hosted by the JGI and co-organized with NIST,  the goal of the Viral EcoGenomics & Applications (VEGA) symposium was to … on how to best capture and characterize uncultivated viruses, understand the role of viruses in natural …
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Benchmarking viromics: an in silico evaluation of metagenome-enabled estimates of viral community composition and diversity
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Glacier-preserved Tibetan Plateau viral community probably linked to warm–cold climate variations
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Structural characterization of a soil viral auxiliary metabolic gene product – a functional chitosanase
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist … the American Society for Microbiology (ASM). Roux leads the Viral Genomics group within the JGI Metagenome Program, and … and characterize viral diversity, understand the role of viruses in natural ecosystems, and functionally explore …
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