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Polar Phytoplankton Need Zinc to Cope with the Cold
… a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab) through the JGI Community Science … .  Through this collaboration, in 2017, they published the first genome sequence of a cold-adapted microalga: the …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… or C-fern, specifically has been studied in plant research laboratories and plant biology courses across the globe for … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab) took on the Open … Nature Communications on Ceratopteris richardii marks the first published manuscript of a genome sequence generated …
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Gut Fungi: Unexpected Source of Novel Chemicals
… of four anaerobic fungal species has revealed, for the first time, that this group is unexpectedly powerful: they … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory. More recently, O’Malley’s team has begun to …
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An Automated Tool for Assessing Virus Data Quality
… story of the blind men who encounter an elephant for the first time. Based on the single body part each blind man … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), has developed a command-line tool …
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Viruses Reprogram Cells into Different Virocells
… the infected microbial cells as virocells, a change in name first described in 2011 which reflects the metabolic changes … Howard-Varona, a postdoctoral researcher in Sullivan’s lab. Their research was enabled in part by the  Facilities … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), and the  …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… of the earth, but most species do not grow easily in the lab. To access the genomes of uncultured  microbes , … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory, is heavily invested in being … sequencing comes in. Single-cell genome sequencing involves taking a single cell and isolating it for analysis. Once …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… of this enzyme family,” said Sang-Woo Han, one of the co-first authors of this work.  Han is an Assistant Professor … Genomics and Systems Biology Division of Lawrence Berkeley National Laboratory (Berkeley Lab). He completed … DNA Synthesis Science program, underscored the value of taking a look at the AT family. “Essentially, the …
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An Integrated Dataset to Understand Ecosystem Interaction
… features to large ecosystem-level processes for the first time. By collecting data from 27 different poplar ( … feedstock. Public accessibility to the data made available through this multidisciplinary approach allows … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). All of this …
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Axel Visel
… organisms. During his postdoctoral training at Lawrence Berkeley National Laboratory, he developed and applied novel computational and … methods for elucidating the gene regulatory landscape of vertebrate genomes, which led to the discovery of …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), shows methanogenesis is not … of methanogenesis, with metagenomic support from the JGI. First they were able to identify the potential for …
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
… a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). The accepted proposals come from … proposals, resulting from 95 letters of intent. For the first time, 63 percent of the accepted proposals come from …
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Streamlining Regulon Identification in Bacteria
… a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). Transcription factors control … which Mouncey leads. RIViT-seq is a three-step process. The first step is the in vitro transcription assay. The second …
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