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Draft Genome Sequence of the Thermoalkaliphilic Caldalkalibacillus thermarum Strain TA2.A1
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Virocell Necromass Provides Limited Plant Nitrogen and Elicits Rhizosphere Metabolites That Affect Phage Dynamics.
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Plotting a Model for Virus-Host Warfare Deep Below Ground
… ecosystem. The Science Altiarchaea are carbon-fixing microbes and targets of multiple viruses in Earth’s deep … by combining a study of microbial communities (metagenomics) and a chemical labelling approach. The Impact … do so, they compared samples collected from an aquifer in 2012 and 2018 against a biofilm sample collected in 2018. …
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You Can Move, But You Can’t Hide
… the interactions that happen between tiny organisms (microbes) located in soils and water. MGEs like viruses and … currently has more than 700,000 plasmids from genomes, metagenomes and metatranscriptomes. To lower barriers to … Science User Facilities operated under Contract No. DE-AC02-05CH11231. This work also received support from the …
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JGI Hosts GPU Hackathon in May
WHEN: May 6-10, 2019 WHERE: JGI With DOE investments in graphical processing … is organizing nearly a dozen hackathons around the world in 2019, only the JGI hackathon is particularly focused on … of six teams will be hosted at the Hackathon, with 1-2 mentors per team. Participants will be expected to have …
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Genomic profiles of four novel cyanobacteria MAGs from Lake Vanda, Antarctica: insights into photosynthesis, cold tolerance, and the circadian clock
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Host genotype and age shape the leaf and root microbiomes of a wild perennial plant
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The Power of One, Amplified
… of how large-scale single cell genomics complements metagenomics studies. The Science Researchers demonstrated the … between the analyzed community members. The Impact Though microbes help regulate the planet’s nutrient cycles and are … User Facility, is supported under Contract No. DE-AC02-05CH11231. This work was supported in part by a Natural …
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Toward Understanding Phage:Host Interactions in the Rumen; Complete Genome Sequences of Lytic Phages Infecting Rumen Bacteria
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… scientist Simon Roux , who was recently selected as the 2025 recipient of the Microbiome Data Prize by the American … (ASM). Roux leads the Viral Genomics group within the JGI Metagenome Program, and coordinates the development of the … analysis to better characterize how viruses infect soil microbes and influence how soil ecosystems function. He was …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … of course, the cells of other organisms. As they infect microbes like bacteria, algae and protists, all kinds of … Beginning in the early 2000s , these environmental metagenomes began to offer a window into viral existence. …
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SIPs with Standards
… microbial communities. These experiments can show which microbes are handling specific nutrients, or what they're …
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