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Niche differentiation of bacteria and fungi in carbon and nitrogen cycling of different habitats in a temperate coniferous forest: A metaproteomic approach
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Horizontal gene transfer of the Mer operon is associated with large effects on the transcriptome and increased tolerance to mercury in nitrogen-fixing bacteria
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A Genomic Perspective Across Earth’s Microbiomes Reveals That Genome Size in Archaea and Bacteria Is Linked to Ecosystem Type and Trophic Strategy
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Natural Prodcast Episode 20: Brian Bachmann
… in the marine ecosystems and marine actinomycetes and cyanobacteria. And we thought we could also– let’s see what caves … And they were– so they were actually good environments for bacteria to live in. So we thought, well, let’s see. But … not fungal. Where else nature can you go see colonies of bacteria just growing? They’re not monocultures there. …
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Matt Blow
… genomic technologies and to understand genome function in bacteria. … al. 2024. scMicrobe PTA: Near Complete Genomes from Single Bacterial Cells bioRxiv , 2024.01. 30.577819 2. Dicenzo et … 3. Baumgart et al. 2021. Persistence and plasticity in bacterial gene regulation. Nature methods 18 (12), 1499-1505 …
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Host population diversity as a driver of viral infection cycle in wild populations of green sulfur bacteria with long standing virus-host interactions
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H2-saturation of high affinity H2-oxidizing bacteria alters the ecological niche of soil microorganisms unevenly among taxonomic groups
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Synergistic interactions between anammox and dissimilatory nitrate reducing bacteria sustains reactor performance across variable nitrogen loading ratios
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JGI Contributes Nine to 2022 Highly Cited Researchers List
… selection of studies these busy bees contributed to:  Giant bacteria visible to the naked eye :  Natalia Ivanova and  … to ground-breaking research following the discovery of bacteria 5,000 times the average size. Woyke’s  Single Cells … discovery lists.  Updates to the Genomic Encyclopedia of Bacteria and Archaea : Under the umbrella of the GEBA, the …
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Complete Genome Sequences for the Anaerobic, Extremely Thermophilic Plant Biomass-Degrading Bacteria Caldicellulosiruptor hydrothermalis, Caldicellulosiruptor kristjanssonii, Caldicellulosiruptor kronotskyensis, Caldicellulosiruptor owensensis, and
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Sphingomonas palmae sp. nov. and Sphingomonas gellani sp. nov., endophytically associated phyllosphere bacteria isolated from economically important crop plants
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Taking Stock of the Known and Unknown Microbial Space
… still unknown.  “We took a deep dive into over 1.8 million bacterial and archaeal genomes to see how much of their … Natalia Ivanova conducted a census of publicly available bacterial and archaeal sequences. Kyrpides heads the JGI’s … MAGs significantly expanded the estimated diversity of Bacteria and Archaea With phylogenetic diversity standing in …
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