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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… other forms of  Chloroflexota that adapted to marine environments hundreds of millions of years ago.  The Impact … in oceans or soils.  A recent study published in  The ISME Journal     focused on a class within  Chloroflexota called  … structures that enable organisms to swim around. However, genome and metagenomic sequencing conducted by the U.S. …
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JGI@25: The Little Alga That Could
In honor of the JGI's 25th anniversary in 2022, we have … of those shared by both humans and flowering plants). Its genome also contains hundreds of genes uniquely associated … in 2007 the full genome was sequenced and published in the journal Science . At the time, the project was co-led by …
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Multi-omics of permafrost, active layer and thermokarst bog soil microbiomes
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Getting to the Root of Plant‐Mediated Methane Emissions and Oxidation in a Thermokarst Bog
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Boosting Small Molecule Production in Super “Soup”
… from engineered yeasts still work in cell-free environments? (Spoiler: Yes.) Think of cells as tiny factories: … Program at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … the first time CRISPR-Cas9 had been used to modify a cell’s genome in order to create lysates with altered metabolic …
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Overview of the Genomes OnLine Database (GOLD)
TBK Reddy gives an overview of the JGI's Genomes OnLine Database and why curated metadata matters. …
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The Power of One, Amplified
… metagenomics studies. The Science Researchers demonstrated the value of conducting large-scale single cell … mobile genetic elements that were missed within paired metagenome assembled genomes (MAGs), and that dominant … microbial populations. The work appeared in The ISME Journal . Members of the Dunfield lab collected samples from …
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An Integrated Dataset to Understand Ecosystem Interaction
… tree and soil dataset for understanding the dynamic relationship between poplar trees and their microbial partners. … were provided by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … (Berkeley Lab). All of this information — 318 metagenomes, 98 plant transcriptomes and 314 metabolomic …
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2022 Progress Report
Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase (KBase), the National Microbiome Data Collaborative (NMDC), and Berkeley Lab … The vision of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user …
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The Genome Portal of the Department of Energy Joint Genome Institute
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The Phaeodactylum genome reveals the evolutionary history of diatom genomes
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Frederik Schulz
Dr. Frederik Schulz joined the DOE Joint Genome Institute in 2016 and is leading the New Lineages of Life Group. His research is focussed on the discovery of novel bacterial, archaeal and eukaryotic … Microbiome. 5 (1), 1-6 Google Scholar … Senior Editor, ISME Journal LBNL LDRD (Soil Protists) FY2022 LBNL LDRD (Viral …
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