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How Filamentous Fungi Sense Food
… of California, Berkeley used a multi-omics approach to reconstruct and model gene regulatory pathways used by the … proposal akin to the Encyclopedia of DNA Elements (ENCODE) project, which is aimed at determining the activity, … the work being done as part of the 1000 Fungal Genomes Project. Funding for the project was also provided by the …
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Adopt-A-Genome
… (California State San Marcos) about how the Adopt-A-Genome project got started. Plus, Kalyani Maitra (California State Fresno) and two students, Angela and Mark Soghomonian share what it was like to take on one of these genomes.  …
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A Redesign for Yeast’s Genome, Chromosome by Chromosome
… genomes in general, Jef Boeke, Weimin Zhang (NYU Langone Health) and Leslie Mitchell (Neochromosome) have worked … to replace yeast’s native chromosomes with synthetic versions. This project has turned out to be an international collaboration, …
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Ray Turner Completes Last Tour of Lab Duty at JGI
For the last 15 years, Ray Turner has been one constant for the Joint Genome Institute. On July 1, … at a high level as JGI transitioned from the Human Genome Project to gaining momentum as a national user facility. He … Your ethics always point due north.” Joe Harkins served as project lead on the new building that would eventually rise …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
For many scientists, the culmination of their work into a written report that is published in … the primary author on this publication and drove the entire project, Visel explained. She continued working virtually … Practical Applications for Fungi Wint began working on the project that culminated in this publication during her …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… 5,000 times bigger than most bacteria. To put it into context, it would be like a human encountering another human … keeps its DNA more organized. “The big surprise of the project was to realize that these genome copies that are … at the JGI, Gros allowed him to continue research on the project. At the JGI, Volland began studying Ca. T. magnifica …
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Natural Prodcast Episode 3: The Primer, Part 3
Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hey there. This is Dan again, and … we need people from outside of the JGI to come to us with projects that will help us actually drive this strategic … – people that we already work with at the JGI in terms of projects that the JGI already has underway, and also find, …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… hermaphrodites, expressing both male and female gametes in one individual. But some, including shrub willow  Salix purpurea , employ the evolutionary strategy we are far more familiar with: … (2017YFC0505203, 2016YFD0600101), and the National Key Project for Basic Research (2012CB114504). The work …
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JGI@25: Fueling Investigation into Methane-Making Microbes
In honor of the JGI's 25th anniversary in 2022, we have … Hungate1000, a catalog of 410 rumen microbe genomes. The project relied upon resources from laboratories around the … research offshoots in totally different areas, beyond the project’s initial scope. Sequencing and culturing this vast …
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Gotta Catch 'Em Gall
In this episode, hear from Kasey and Patrick about how this project unfolded, and how they worked with the JGI's …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… enabled by the JGI DNA Synthesis Science Program. Fashioning DNA outside a cell is key to interrogating what genes … in five years, have come out of the JGI-supported project. “The JGI DNA Synthesis Science Program has been instrumental in establishing larger-scale research projects in our group. It’s enabled us to accelerate gene, …
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Toasting to the 2020 JGI-UC Merced Summer Internship Program
On July 30, UC Merced students and their JGI mentors toasted … one JGI mentor. Together, they work through a specific project that aligns with each intern’s interests or … in some cases daily, check-ins with their mentors to ensure projects progressed despite the challenges of remote work. …
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