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PEATmoss (Physcomitrella Expression Atlas Tool): a unified gene expression atlas for the model plant Physcomitrella patens
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NAP: The Network Analysis Profiler, a web tool for easier topological analysis and comparison of medium-scale biological networks
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Phytozome: Tutorial Workshop from 2022 CROPS Conference @HudsonAlpha
… the June 2022 CROPS Conference at the HudsonAlpha Institute for Biotechnology. Phytozome is the Plant Comparative Genomics portal of the Department of Energy Joint Genome …
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PhycoCosm Tutorial
… collection of sequenced algal genomes, omics data and comparative analysis tools developed by the Joint Genome Institute (JGI), a US …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
Across four forests, researchers have leveraged data from the 1000 … RNA to understand gene expression, and developed new tools to map that soil RNA to fungal genomes.  The U.S. … The JGI provides integrated high-throughput sequencing and computational analysis that enable systems-based scientific …
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A One-Stop Shop for Analyzing Algal Genomes
Understanding the genetic underpinnings responsible for these traits takes us closer to harnessing algae for … in algae. PhycoCosm joins other online data portals and tools created by JGI researchers, including the Integrated … system for microbial and metagenome datasets, MycoCosm for comparative analysis of fungal genomes, and Phytozome for …
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JGI Scientists Pen Genome Watch Articles
Woyke and other JGI researchers made their debut writing for the Nature Reviews Microbiology column last year — and … Laboratory, are sharing their expertise in environmental genomics by writing for the column Genome Watch in  Nature … for more sustainable agriculture and was written by JGI computational biologist Rekha Seshadri. Writing the  Nature …
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Help from Citrus’ Bitter, Hardier Cousin
… clues to disease-resistance that could prove fruitful for saving Citrus from greening disease. You’ve probably … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy … The JGI provides integrated high-throughput sequencing and computational analysis that enable systems-based scientific …
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Comparative Genomics of the Dormancy Regulons in Mycobacteria
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PhycoCosm, a comparative algal genomics resource
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Comparative genomics of biotechnologically important yeasts
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Jane Grimwood Named HudsonAlpha Genomics Chair
Spencer Chair in Genomics at the HudsonAlpha Institute for Biotechnology! Loretta Spencer served as a manyterm … large-scale multi-institutional JGI projects and resulting publications that Grimwood contributed to include: A 2021 … and biology of human chromosome 19 The DNA sequence and comparative analysis of human chromosome 5 The sequence and …
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