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Genomic Encyclopedia of Bacterial and Archaeal Type Strains, Phase III: the genomes of soil and plant-associated and newly described type strains
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In depth metagenomic analysis in contrasting oil wells reveals syntrophic bacterial and archaeal associations for oil biodegradation in petroleum reservoirs
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Phylogenetic and Functional Analysis of Metagenome Sequence from High-Temperature Archaeal Habitats Demonstrate Linkages between Metabolic Potential and Geochemistry
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Genomic Comparison of Two Family-Level Groups of the Uncultivated NAG1 Archaeal Lineage from Chemically and Geographically Disparate Hot Springs
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Community ecology across bacteria, archaea and microbial eukaryotes in the sediment and seawater of coastal Puerto Nuevo, Baja California
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Systematic Identification of Gene Families for Use as “Markers” for Phylogenetic and Phylogeny-Driven Ecological Studies of Bacteria and Archaea and Their Major Subgroups
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A Mentor’s Perspective on Training the Next Generation
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… By leveraging new tools and large-scale data mining, JGI … as reliable markers for classifying species and studying diversity in complex biological systems. By making the tools and data available through MycoCosm — a … The work conducted by the U.S. Department of Energy Joint Genome Institute …
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iPHoP: A Matchmaker for Phages and their Hosts
… helps fill in what cultivation can’t. The Science At first, viruses are merely toolkits. To do anything, they must find … multiple predictions to reliably match viruses with their archaea and bacteria hosts. The Impact Within the domains of … program,  described in Plos Biology , the research team led by scientists at the U.S. Department of Energy Joint Genome …
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Natural Prodcast Episode 14: Nigel Mouncey
… with my boss, JGI Director Nigel Mouncey. DAN: I’ll start by saying this is the first in-person recording that I’ve … A few examples of those are obviously expanding the diversity of known secondary metabolites and their … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …
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Uncovering Novel Genomes from Earth’s Microbiomes
… genomes for just a small fraction of Earth’s microbial diversity. Because most microbes cannot be cultivated under … the world, expanding the known diversity of bacteria and archaea by 44%, is now available and  described November 9, 2020 in  … genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. …
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Giant virus diversity and host interactions through global metagenomics
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