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Operating Expenses
FY2023 Spending Profile The JGI is funded primarily by the DOE Office of Biological and Environmental Research (BER), a program within the DOE …
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Optofluidic Raman-activated cell sorting for targeted genome retrieval or cultivation of microbial cells with specific functions
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Assembly, comparative analysis, and utilization of a single haplotype reference genome for soybean
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Metagenomes from Arctic Soil Microbial Communities from the Barrow Environmental Observatory, Utqiaġvik, AK, USA
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Better Crops With a Pointillist Approach to Plant Genomics
In this episode, we peer into plant cells. Researchers are using measurements from single cells to understand which genes help plants grow, get …
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One Bacterial Cell, One Complete Genome
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… tiny algae. The cold polar oceans give rise to some of the largest food webs on Earth. And at their base are … photosynthesizing organisms called phytoplankton (from the Greek phyto for ‘plant’ and planktos for … expressing, the team sequenced their RNA transcripts. All sequencing was done through the JGI Community Science …
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Synthesis
… automations for DNA design, assembly and analysis Overview of synthesis products The JGI DNA Synthesis platform enables users to validate hypotheses generated from mining genomic data by designing and assembling … CRISPR gRNA design tool  … BOOST provides a suite of tools to automate sequence design for assembly by Gibson, …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… the slightly murky waters in the tube look like a scoop of stormwater, complete with leaves, debris, and even … a co-first author on the study, performed the 16S rRNA gene sequencing to identify and classify the prokaryote. “I … level. They amplified, sequenced and assembled the genomes. In parallel, Gros’ lab also used a labeling …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
JGI-led team significantly expands the global diversity of large and giant viruses. While the microbes in a single … and genome size from small, to large and even giant. The genomes of giant viruses are on the order of 100 times the … available but also complementary single-cell sorting and sequencing of viruses together with their unicellular …
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Cell Extracts from Bacteria and Yeast Retain Metabolic Activity after Extended Storage and Repeated Thawing
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Doubling Down on Known Protein Families
… online Oct. 11, 2023 in  Nature highlights the vast array of functional diversity of microbes through a novel approach … through the publicly available  Integrated Microbial Genomes & Microbiomes (IMG/M) database, they successfully … replicating a whole community is impossible.  Metagenomic sequencing allows researchers to study the entire genetic …
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