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… Across four forests, researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal … “Now with these new tools — metatranscriptomics, RNA sequencing of soil RNA — we can access — ‘What are they … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …

… (Graphic: Neil Byers) The JGI launched the 1000 Fungal Genomes (1KFG) Project through a 2012 Community Science … “We currently have 19 genomes sequenced, 15 that are in sequencing or assembly right now, and eight more that we are … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — …

… darwinii are the others. All of these cotton lineages have genomes approximately 2.3 billion bases or Gigabases (Gb) in … their genomes were “remarkably” stable. “We thought we were sequencing the same genome multiple times,” Schmutz … Science “The results described in this  Nature Genetics publication will facilitate deeper understanding of cotton …

… In this episode, we peer into plant cells. Researchers are using measurements from single cells to understand which genes help plants grow, get …

… the genetic make-up of specific uncultivated microbes from complex environmental samples. The Science A team led … and then efficiently retrieve and characterize their genomes. The Impact Despite great strides in generating … for members of the microbial world through bulk community sequencing (metagenomics) and single-cell genomics, the vast …

… measuring cyclic di-GMP in bacteria through work enabled by the JGI’s Community Science Program (CSP) . The Impact … changes in cyclic di-GMP via live cell imaging. Summary From digestive tracts to plant surfaces and soil, bacteria … network that drives bacterial colonization and motility. By building on a previously developed combined approach, …

… gene clusters (BGCs) in native hosts, the complexity of cloning and expressing a given BGC in various hosts, availability of sequenced genomes, and computing resources needed to predict BGCs from available genome sequences. The DOE Joint Genome …

… podcast minisode.)  In 2016, the JGI accepted a proposal from Sebastien Duplessis of the French National Institute … was just like rediscovering genetics, with the evolution of sequencing technologies and the evolution of … Sainsbury Institute, by annotating not just one but three genomes for P. pachyrhizi , which are available on MycoCosm …