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Application of Long Sequence Reads To Improve Genomes for Clostridium thermocellum AD2, Clostridium thermocellum LQRI, and Pelosinus fermentans R7
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SNP Assay Development for Linkage Map Construction, Anchoring Whole-Genome Sequence, and Other Genetic and Genomic Applications in Common Bean
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Natural Prodcast Episode 19: Bill Fenical
… too was an issue. What function, what utility, what kind of applications might molecules from the ocean have? In the … So, this was when we started saying, we have to have the genomes. We have to look at the full picture of these. And … that we needed to ask whether they would do the full genomes for us. So fortunately, the secondary metabolite …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… was released to the public in a highly-cited 2006 publication in the journal Science . This provided a … them. Despite advances in the years since this landmark publication, SOD continued to sweep through dozens of … Publication: Tyler BM et al. Phytophthora genome sequences …
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JGI announces 2024 Functional Genomics awardees
… functions allows researchers to use them for engineering applications in support of advancing the bioeconomy.  This year’s project goals range from improving crop productivity for bioenergy through enhanced red-light …
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Making a Lichen Together
… For the first time, a team has analyzed in parallel the genomes and transcriptomes of both partners to better … bioengineering symbiotic microbial consortia for bioenergy crops. And because lichens are dominant carbon and nitrogen … mere seconds or minutes — a trait that could help improve crop drought resilience. It’s a superpower even Marvel’s …
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A Genomic Catalog of Stress Response Genes in Anaerobic Fungi for Applications in Bioproduction
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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… metagenome assemblies. Q&A from the Webinar: Input & sequencing Q(uestion): How much DNA is needed for “regular” … weight DNA) is an important factor as well for PacBio metagenomes. Q: How many PacBio metagenomes can I submit?  How deeply are metagenomes sequenced? …
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Enemy or ally: a genomic approach to elucidate the lifestyle of Phyllosticta citrichinaensis.
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A k-mer-based approach for phylogenetic classification of taxa in environmental genomic data.
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Expanding Virophage Diversity
… Virophages are small viruses with double-stranded DNA genomes that co-infect eukaryotic cells along with giant … virophage genome sequences 10-fold through computational approaches. By mining more than 14,000 publicly available … early version of the paper at the 2018 Viral EcoGenomics & Applications (VEGA) Symposium. The work also used resources …
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