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How Filamentous Fungi Sense Food
… researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … and optimized by Ronan O’Malley, who leads the JGI’s Sequencing Technologies group. DAP-seq allowed the team to identify the … US Department of Energy Contract DE-AC02-05CH11231, a Joint Genome Institute Community Science Program grant (CSP 982), …
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Whole Genome Sequencing of Thermus oshimai JL-2 and Thermus thermophilus JL-18, Incomplete Denitrifiers from the United States Great Basin
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Katherine Louie
… where she manages metabolomics production for community sequencing projects and heads R&D efforts to expand the … capabilities and product offerings for JGI users.  Using cutting-edge mass spectrometry-based techniques, the … of high-throughput untargeted analysis pipelines.  Beyond profiling over 10k samples/year, Dr. Louie and her team work …
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Shotgun metagenome data of a defined mock community using Oxford Nanopore, PacBio and Illumina technologies
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… but proposals submitted by July 30 will be included in the next review. “So webinars like this didn’t really fully … the data had driven his lab’s focus on guide RNA library generation and development and its applications. “I moved to … is submitted to the JGI, JGI scientists will go over the whole proposal for the technical feasibility first. …
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A segmental genomic duplication generates a functional intron
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User Advisory Committees
… All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National … and strategic objectives of the microbial and metagenome programs. The committee serves as the program's key …
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Whole genome comparisons of Fragaria, Prunus and Malus reveal different modes of evolution between Rosaceous subfamilies
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JGI Earth Month: Wetlands Work in #TenHundredWords
… Kaze took on the challenge of explaining her research using the ten hundred most commonly used words in the … developed between the two institutions to help train the next generation workforce.     … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Site-Selective C–H Halogenation Using Flavin-Dependent Halogenases Identified via Family-Wide Activity Profiling
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Examples: Successful LOIs & Submissions
… CSP Large-Scale LOI #2 … FICUS Example #2 …
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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… at the University of California, Berkeley and the Joint Genome Institute, a DOE Office of Science User Facility, … , and the results are described in ACS Chemical Biology. Using fluorescent biosensors to monitor the intracellular … 1) complementation of split luciferase (CSL) and, 2) bioluminescence resonance energy transfer (BRET)-based …
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