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Increasing the Scale of the Mass Spectrometry Query Language Compendium with Explainable AI
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… New studies show methanogenesis is not exclusively for Euryarchaeota. Atmospheric … enabled by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Lab (EMSL), another DOE user facility located at Pacific Northwest National Laboratory. “Without a culture, or without …
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Raman-based sorting of microbial cells to link functions to their genes
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Ploidy evolution in a wild yeast is linked to an interaction between cell type and metabolism
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Phosphate transporters in marine phytoplankton and their viruses: cross‐domain commonalities in viral‐host gene exchanges
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JGI Hosts GPU Hackathon in May
… WHEN: May 6-10, 2019 WHERE: JGI With DOE investments in graphical … (OLCF), NVIDIA, and the Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user … to explore applications in the life sciences that can be ported to the GPU architecture. A GPU hackathon is a five-day …
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Linking secondary metabolites to gene clusters through genome sequencing of six diverse Aspergillus species
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The Sugar Metabolic Model of Aspergillus niger Can Only Be Reliably Transferred to Fungi of Its Phylum
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Genome-scale model development and genomic sequencing of the oleaginous clade Lipomyces
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Improving the Cacao Genome and Phytozome
… Global chocolate brands can’t exist without cocoa According to … will be cocoa for chocolate tomorrow In 2010, a draft first genome of  Theobroma cacao  – the tree that produces cacao beans – was released by a Mars, Inc.-led consortium through the Cacao Genome Database project. The genome …
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How To Use Our Systems
… One of the JGI’s key assets is our user community, comprising a broad range of … have yielded numerous, high-quality outputs, such as data, publications and software. The JGI supports the entire data life cycle, and embeds metadata and its …
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John Vogel
… Dr. Vogel joined JGI in 2014 to establish a plant functional genomics program. Prior to this, … generated hundreds of transgenic switchgrass lines in an effort to create improved varieties for biomass production. He … techniques) and utilizing these resources to understand genome organization and regulation, abiotic stress …
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