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PCR and Omics Based Techniques to Study the Diversity, Ecology and Biology of Anaerobic Fungi: Insights, Challenges and Opportunities
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Metagenomes and Metagenome-Assembled Genomes from Microbiomes Metabolizing Thin Stillage from an Ethanol Biorefinery
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Persistent memory as an effective alternative to random access memory in metagenome assembly
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Metagenomic Discovery of Biomass-Degrading Genes and Genomes from Cow Rumen
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… requires rigorous research, written skill, above all else, determination. Rhondene Wint, an alumna of the DOE Joint Genome Institute (JGI)-UC Merced internship program and … current PhD student, reached this milestone with a recent publication in Molecular Biology and Evolution . “It’s my …
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Natural Prodcast Episode 9: Roger Linington
… DAN: Welcome back for episode 9 of Natural Prodcast. This week, Alison and I talk to Roger Linington, from Simon Fraser University in British Columbia, Canada. … products field as it relates to structure elucidation and genome mining, and how we might start to better connect …
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Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea
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Metagenomes and Metagenome-Assembled Genomes from Substrate-Amended Hot Spring Sediment Incubations from Yellowstone National Park
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Recovery of genomes from metagenomes via a dereplication, aggregation and scoring strategy
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IMG/PR: a database of plasmids from genomes and metagenomes with rich annotations and metadata
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Improving the Cacao Genome and Phytozome
… couldn’t exist without cocoa.  But today the plant is under threat due to climate change and devastating fungal … will be cocoa for chocolate tomorrow In 2010, a draft first genome of  Theobroma cacao  – the tree that produces cacao … by HudsonAlpha scientists, with the help of funding from Mars Wrigley. The annotated genome has been updated to …
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How to Submit Sequencing Samples
… Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing sample-level reports and … to the  JGI. The documents below (posted with permission) demonstrate the importance of proper nucleic acid …
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