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At the Forefront of Terrestrial Virus Research
Gary Trubl is finishing his PhD in Microbiology at The Ohio State University, co-advised by Drs. Virginia Rich and Matthew Sullivan. He shared a few …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… ( Actinomycetota ), a group of bacteria with diverse metabolic activities. Found in marine and terrestrial … to define the current shape of the microbial tree of life by filling in genomic information for thousands of … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… s ditched their flagella and other traits when migrating back to the ocean. The Science Scientists have … However, genome and metagenomic sequencing conducted by the U.S. Department of Energy Joint Genome Institute, a … organic and inorganic compounds. Studying their diverse metabolic capabilities offer insights into how microbial …
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JGI announces 2024 New Investigator portfolio
The JGI is eager to work and share our tools with a widening circle of researchers. That’s why each year we look for … spanning the resilience of desert grasslands to the metabolic savviness of microbial ecosystems at the forest floor and along ocean shores. Their results could bring key insights into …
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Uncovering Novel Genomes from Earth’s Microbiomes
… expanding the known diversity of bacteria and archaea by 44%, is now available and  described November 9, 2020 in  … team on predicting host-virus connections between all viruses in  IMG/VR (Virus) and the GEM catalog, associating … designed for biologists and bioinformaticians, developed metabolic models for thousands of MAGs. The models are now …
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Effects of Polar Light Cycle on Microbial Food Web
… change with the seasons. The Science Light-harvesting bacteria (phototrophs) in Antarctica’s Ace Lake defy the … microbial populations in other Antarctic lakes and the nearby Southern Ocean shift from phototrophs to archaea when … observations regarding the contributions of algae and viruses to the ecosystem were noted, but require further …
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Extracting the Secrets of Secondary Metabolites
… for survival, may now be easier to characterize following a proof-of-concept study in which researchers paired … in 2019. Now, that power is poised to grow exponentially by combining it with CRISPR.  By employing CRAGE, … a lab environment, shining a light into this “biological dark matter.”  It also offers CRISPR a point of entry. By …
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Nontargeted virus sequence discovery pipeline and virus clustering for metagenomic data
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Partnerships: Myco-Ed
Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology teaching … analyses. The Mycocosm user interface is designed for use by mycologists and researchers, facilitating the transition … reproducible and customizable workflows are easily adapted by instructors training their students in computational …
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Hot springs viruses at Yellowstone National Park have ancient origins and are adapted to thermophilic hosts
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Products
The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, DNA synthesis and … ), mapping 273/273 Metagenome Cell Enrichments Obtained by physical separation of a biologically relevant unit from …
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The ectomycorrhizal basidiomycete Hebeloma cylindrosporum undergoes early waves of transcriptional reprogramming prior to symbiotic structures differentiation
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