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A Complex Confection Decoded: Sugarcane Reference Genome
… was the last major crop without a reference quality genome and now crop researchers can work toward advancing … world’s most harvested crop by tonnage, sugarcane accounts for 80% of global sugar production. A reference genome for the sugarcane cultivar R570 has been  published …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… collaborated with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … senior author of the study and head of the JGI’s Microbiome Annotation Group. Many of these bacterial and archaeal … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …
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Cyanobacterial-based approaches to improving photosynthesis in plants
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Harnessing glycosylation to improve cellulase activity
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Metabolomics Technology Group
… networks of environmental microbes and how they transform their environment. Research Team    … For further details, please reach out to the Group Lead …
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Refined annotation and assembly of the Tetrahymena thermophila genome sequence through EST analysis, comparative genomic hybridization, and targeted gap closure
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Annotation of metagenome short reads using proxygenes
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AmiGO: online access to ontology and annotation data
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MAGI: A Method for Metabolite Annotation and Gene Integration
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Natural Prodcast Episode 22: Alison Narayan
… the series of interviews we recorded at the Society for Industrial Microbiology and Biotechnology (SIMB) Natural … enzymes to do chemical reactions. Obviously, in my work, in genome mining, we have an awful lot of crossover, where us genome miners get really jazzed about finding enzymes that …
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Building Sphagnum Genomic Resources
… model system focused on carbon cycling studies, rather than for food or fuel applications. The Impact Sphagnum’s impact … researchers are aiming to have two high quality reference genomes for peat-forming species that occupy different … – Sphagnum fallax and S. magellanicum. The draft genome for  S. fallax is already available on the  JGI plant …
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Katherine Louie
… to develop the metabolomics program, and in 2019 became Platform Lead where she manages metabolomics production for … metabolomics with genomic data (MAGI) for functional annotation and identifying unknown compounds (Pactolus). … … Sci Rep. 2013;3: 1656. … Education … Selected Publications …
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