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Guidelines for public database submission of uncultivated virus genome sequences for taxonomic classification
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Old can be new again: HAPPY whole genome sequencing, mapping and assembly
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JGI Welcomes New UEC Members
… Executive Committee (UEC) represents the JGI user community and is responsible for providing input and advice on JGI policies and practices that … who represent the scientific areas of plant genomics, DNA synthesis and metabolomics, respectively. To …
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An Integrated Dataset to Understand Ecosystem Interaction
… yields a comprehensive tree and soil dataset for understanding the dynamic relationship between poplar trees and their … managed through human intervention. By leveraging metagenomics, scientists were able to analyze the DNA of … were provided by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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JGI Announces 2026 New Investigator Portfolio
… N. Zepernick.    Each year, the JGI solicits novel research projects from PIs who have not led any previously accepted … these researchers will harness capabilities including metagenomics, metatranscriptomics and genome assembly to investigate microbial and plant …
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Jane Grimwood Named HudsonAlpha Genomics Chair
… who has been appointed the Loretta Purdy Spencer Chair in Genomics at the HudsonAlpha Institute for Biotechnology! … City. Grimwood is also co-director of the HudsonAlpha Genome Sequencing Center. Grimwood heads the Library … large-scale multi-institutional JGI projects and resulting publications that Grimwood contributed to include: A 2021 …
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JGI@25: Studying Sorghum’s Survival Skills
… climate has earned it a place on the JGI’s Flagship Plant Genome roster. Sorghum has an important feature in common … reference genome for Sorghum bicolor . Since then, 2,993 publications, 107 patent applications, and 53 patents have … strengths into other plants. A brief timeline of sorghum projects at the JGI: 2009: JGI and collaborators use …
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A Collaboration to Improve Plant Genome Annotations Across Species
… To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the HudsonAlpha … the JGI Plant Gene Atlas in  Nucleic Acids Research . The project spans 15 years and involves more than 17 research … resource like this important to the field of plant genetics/genomics? Avinash: Having a better handle on the gene …
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The standard operating procedure of the DOE-JGI Microbial Genome Annotation Pipeline (MGAP v.4)
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Genomic Methods and Microbiological Technologies for Profiling Novel and Extreme Environments for the Extreme Microbiome Project (XMP).
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Draft Genome Sequences of Five New Strains of Methylophilaceae Isolated from Lake Washington Sediment
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JGI announces 2024 New Investigator portfolio
… The JGI is eager to work and share our tools with a widening circle of … That’s why each year we look for novel research projects — aligned with DOE missions and from PIs who have …
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