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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… tiny algae. The cold polar oceans give rise to some of the largest food webs on Earth. And at their base are … expressing, the team sequenced their RNA transcripts. All sequencing was done through the JGI Community Science … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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User Executive Committee Charter
… users and their science including technical capabilities offered, proposal review procedures, and the annual user … recommendations to the JGI regarding technical capabilities offered, including areas where more or less capacity is … annual JGI User Meeting, as well as input on other aspects of the meeting such as duration, location, and cost; …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
For many scientists, the culmination of their work into a written report that is published in a … current PhD student, reached this milestone with a recent publication in Molecular Biology and Evolution . “It’s my … to learning about how to navigate and analyze large genomic datasets during the internship, Wint also began …
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Raman-based sorting of microbial cells to link functions to their genes
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Plotting a Model for Virus-Host Warfare Deep Below Ground
Science Altiarchaea are carbon-fixing microbes and targets of multiple viruses in Earth’s deep subsurface. They are … by combining a study of microbial communities (metagenomics) and a chemical labelling approach. The Impact … i.e., by Harald Huber and Sebastien Ferreira-Cerca, and sequencing of MSI metagenomes within the Census of Deep Life …
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Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
… inviting researchers to apply for access to multiple genomics and molecular characterization capabilities in just one research proposal. Guest speaker Michelle O’Malley of UC Santa Barbara talked about how her approved FICUS … single cell capabilities range from traditional single cell sequencing and mini-metagenomics to more targeted …
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Obtaining genomes from uncultivated environmental microorganisms using FACS–based single-cell genomics
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Katherine Louie
… where she manages metabolomics production for community sequencing projects and heads R&D efforts to expand the … and custom software for integrating metabolomics with genomic data (MAGI) for functional annotation and … Sci Rep. 2013;3: 1656. … Education … Selected Publications …
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Doubling Down on Known Protein Families
… online Oct. 11, 2023 in  Nature highlights the vast array of functional diversity of microbes through a novel approach … replicating a whole community is impossible.  Metagenomic sequencing allows researchers to study the entire genetic …
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Draft genome sequence of Pseudomonas extremaustralis strain USBA-GBX 515 isolated from Superparamo soil samples in Colombian Andes
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Tanja Woyke
After studying the mechanism of action of antifungal natural products and their … deciphered function and host-symbiont interplay using metagenomics. Taking on a Research Scientist position in 2007, … User Programs … Education … Awards and Service … Selected Publications …
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Guidelines for public database submission of uncultivated virus genome sequences for taxonomic classification
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