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Extensions of BLUP Models for Genomic Prediction in Heterogeneous Populations: Application in a Diverse Switchgrass Sample
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JGI@25: Studying Sorghum’s Survival Skills
… climate has earned it a place on the JGI’s Flagship Plant Genome roster. Sorghum has an important feature in common … but other important crops as well. In 2009, the JGI sequenced and analyzed the first reference genome for Sorghum bicolor . Since then, 2,993 publications, 107 patent applications, and 53 patents have …
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Proteomics for Validation of Automated Gene Model Predictions
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Corymbia Genome Expands Terpene Synthesis Knowledge
… Genome annotations of two C. citriodora subspecies broaden understanding of the … revealed the largest number of TPS genes of any currently sequenced plant, a number closely followed by E. globulus . … rapid genetic expansion which partially explains the great variety of terpene products in nature. As part of a proposal …
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Making a Lichen Together
… For the first time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their partnership … For the first time, a team has analyzed in parallel the genomes and transcriptomes of both partners to better … nitrocellulose filters in Petri dishes. The scientists also sequenced the fungus and photobiont’s genomes and compared …
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Gallionellaceae in rice root plaque: metabolic roles in iron oxidation, nutrient cycling, and plant interactions.
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Reduced methane emissions in transgenic rice genotypes are associated with altered rhizosphere microbial hydrogen cycling
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Viral dark matter and virus–host interactions resolved from publicly available microbial genomes
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Enriching public descriptions of marine phages using the Genomic Standards Consortium MIGS standard
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Phenotypic and genomic signatures of interspecies cooperation and conflict in naturally occurring isolates of a model plant symbiont
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User Executive Committee Charter
… users and their science including technical capabilities offered, proposal review procedures, and the annual user … recommendations to the JGI regarding technical capabilities offered, including areas where more or less capacity is … annual JGI User Meeting, as well as input on other aspects of the meeting such as duration, location, and cost; …
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A roadmap for equitable reuse of public microbiome data
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