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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… DNA Synthesis Science group held a  JGI Engagement: Accessing Functional Genomics Capabilities Webinar inviting … heard about the JGI synthesis grant during a presentation that [DNA Synthesis Science Head] Yasuo [Yoshikuni] gave back in 2016.” Alper’s first approved JGI proposal came through the Functional Genomics (formerly DNA …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… Gardeners and farmers around the country recognize that crop varieties grow best in certain regions. Most plant species have adapted to their … that is affiliated with the GLBRC. Additional samples came from U.S. Department of Agriculture stock centers, … high-throughput sequencing and computational analysis that enable systems-based scientific approaches to these …
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Architecture of thermal adaptation in an Exiguobacterium sibiricum strain isolated from 3 million year old permafrost: A genome and transcriptome approach
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How Maize Makes An Antibiotic Cocktail
… Maize produces a family of compounds that protects it against infections — using surprisingly few enzymes. The … are to maize health. Infections with a stalk-rotting fungus ( Fusarium graminearum ) and a bacterium that causes … sesquiterpenoids, National Science Foundation Plant-Biotic Interactions Program (grant no. 1758976 to E.S. and P.Z.) …
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JGI@25: The Little Alga That Could
… in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable … genome in the early-2000s. She and other researchers came together for what was then called a JGI Jamboree, a … sequences have been cited in almost one-fourth (23.8%) of publications focused on that specific algae. The reference …
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Massive lateral transfer of genes encoding plant cell wall-degrading enzymes to the mycoparasitic fungus Trichoderma from its plant-associated hosts
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Mindfully Moving JGI
… JGI is in the process of shifting its operations from Walnut Creek to the heart of the Berkeley Lab campus. … sequencing machines at maximum) maintained by a workforce that numbered more than 100 at its peak, all the machines … high-throughput sequencing and computational analysis that enable systems-based scientific approaches to these …
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Webinars on Offerings & Capabilities
… Below are a list of webinars that can help you through the submission process by better understanding the capabilities and resources available for your … here . You can find additional webinars covering how to use our data portals here.  …
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Sequencing Technologies & Products
…   Our Sequencing Technologies Group is well-integrated across JGI departments to ensure a robust offering of sequencing capabilities and … An assay used for profiling transcription factor binding sites across entire … platforms, substantially increasing efficiency and scalability. Read more about DAP-seq in this science feature. …
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Toward a Standards-Compliant Genomic and Metagenomic Publication Record
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A roadmap for equitable reuse of public microbiome data
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Benjamin Cole
… Dr. Cole is interested in studying how plants interact with their environment. Prior to joining the Joint Genome Institute, his focus was primarily on how plants interpret different light cues by altering their growth program, … of California, San Diego (PhD, 2011) Rensselaer Polytechnic Institute (B.S., 2006) …
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