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Olpidium, The Key to the Origin of Terrestrial Fungi
Igor Grigoriev from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … JGI’s 1000 Fungal Genomes Project, which aims to provide genomic information for every family of fungi. In the … attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of …
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Detection of short-term cropping system-induced changes to soil bacterial communities differs among four molecular characterization methods
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Development of PCR-based markers for the identification and detection of Lophodermella needle cast pathogens on Pinus contorta var. latifolia and P. flexilis
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Prokaryotic viruses impact functional microorganisms in nutrient removal and carbon cycle in wastewater treatment plants
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JGI & KBase at PAG XXVII
XXVII Conference (PAG) takes place January 12-16, 2019, in San Diego, Calif. Representatives from the DOE Joint Genome Institute (JGI) and the  DOE Systems Biology … how you can use the KBase system to accelerate your plant genomics research. Click here to download a list of talks …
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Water aging and the quality of organic carbon sources drive niche partitioning of the active bathypelagic prokaryotic microbiome
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
For the first time in several years, the DOE Joint Genome Institute hosted … Christopher Bivins and mentor Satria Kautsar, Comparing BGC Detection Tools and Exploring Novel BGC Detection Techniques … huge amounts of data. I was excited to work on fungal genomics and the fact that I got to do a project involving …
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Emiley Eloe-Fadrosh
Dr. Eloe-Fadrosh joined the JGI in 2014 to pursue her research interests in … et al. 2016. Metagenomics uncovers gaps in amplicon-based detection of microbial diversity. Nature Microbiol. 1: … Futures … Metagenome Science Program … Education … Selected Publications … Awards and Service …
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JGI on the 2021 Highly Cited Researchers List
… among those recognized by Clarivate Analytics for demonstrating “significant influence in their chosen field or fields through the publication of multiple highly cited papers during the last … past year, through programs including the JGI-UC Merced Genomics Internship Program and the DOE Office of Science …
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Marine Microbe Contains Multitudes
A deep dive into microbial genomics reveals one bacterial species is made of four ecologically distinct groups with different lifestyles. The Science The …
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Better Genome Editing for Bioenergy
… part of CRISPR-Cas9 technology to enable improvements in microbial oil production. The Science CRISPR-Cas9 is a powerful, high-throughput gene-editing tool that can help scientists engineer organisms for … , the scientists thus set out to identify which sgRNA sequences were reliable. In an elegant, quantitative screen, …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
New 5-year strategic plan outlines how the JGI will advance the bioeconomy, leveraging … has released its newest 5-Year Strategic Plan: Innovating Genomics to Serve the Changing Planet (download a copy at … to grow in areas such as developing pathogen-agnostic detection and prediction strategies for types of as-yet …
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