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… for diverse experiment types, with main focus areas being genome variation, transcriptomics and epigenomics. Our work varies in scope from the development of highly customized analysis workflows for new product types, to the development of automated analysis pipelines for standard sequencing …

… scientific projects. These solutions include large-scale genome variants analyses, next-generation transcriptome de … metagenome and metatranscriptome assembly, Hadoop based on sequence analysis framework, etc. For example, this group … metagenome binning software … Education … Selected Publications … Software …

… email request reached  Emiley Eloe-Fadrosh , the Metagenome Program Head at the  U.S. Department of Energy (DOE) … samples to the JGI for sequencing.  While JGI processed, sequenced, and analyzed the soil samples, the JGI offered 7 … and organic carbon concentration. From Field Studies to Publication Together as a class, the students learned about …

… researchers built an interactive and comprehensive database of fermentative prokaryotes. The Science Most organisms use … including the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … phenotype and genotype of fermentative prokaryotes on IMG … Publication … Datasets … Datasets … Datasets …

… data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one place where you can … algal genomes can be incredibly complex and difficult to sequence and understand. A team of researchers led by Algal …

… cycling, and is interested in understanding the genomic basis and ecological consequences of microbe-microbe interactions. Using metagenomes recovered directly from environmental samples and …

A team has optimized a crucial part of CRISPR-Cas9 technology to enable improvements in … Cas9 needs guide RNA to lead it to the correct sequence to snip — but not all guides are effective. To … included researchers at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User …