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Natural Prodcast Episode 22: Alison Narayan
… enzymes to do chemical reactions. Obviously, in my work, in genome mining, we have an awful lot of crossover, where us genome miners get really jazzed about finding enzymes that … sure. JACKIE WINTER: I mean. ALISON NARAYAN: Yeah, this is beyond my expertise and being able to predict which enzymes …
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Mapping the Earth’s Hidden Fungal Kingdom
… Researchers with the Department of Energy (DOE) Joint Genome Institute (JGI)’s Fungal and Algal Science Program … Earth's fungal kingdom. The manuscript reviews about 200 publications linking evolutionary history and innovations … with a sampling puzzle of extraordinary complexity. Beyond the sheer number of undiscovered species lies an even …
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How To Use Our Systems
… have yielded numerous, high-quality outputs, such as data, publications and software. The JGI supports the entire data …
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JGI Scientists Pen Genome Watch Articles
… Researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … in environmental genomics by writing for the column Genome Watch in  Nature Reviews Microbiology .  The latest … “Given the great expertise in microbial genomics and metagenomics of the microbiology-focused groups at the Joint …
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Biases in genome reconstruction from metagenomic data
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A metagenomic perspective on the microbial prokaryotic genome census
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Advances and challenges in understanding evolution through genome comparison: meeting report of the European Molecular Biology Organization (EMBO) lecture course “Evolutionary and Comparative Genomics”
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A Complex Confection Decoded: Sugarcane Reference Genome
… was the last major crop without a reference quality genome and now crop researchers can work toward advancing sugarcane biotechnology. The Science Considered … accounts for 80% of global sugar production. A reference genome for the sugarcane cultivar R570 has been  published …
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Open Frameworks Training the Next Generation of Scientists
… involving academic faculty and researchers at the DOE Joint Genome Institute (JGI), a DOE Office of Science User … Network), a National Science Foundation-funded program, for advancing student research and skill development while … genomics. Fungi can be better understood through reference genomes, but unfortunately there are not many available to …
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Coupled laboratory and field investigations resolve microbial interactions that underpin persistence in hydraulically fractured shales
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… collaborated with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … the JGI has pioneered, including single-cell genomics and metagenomics. The GEBA initiative has also utilized a very … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… of stable, heavy isotopes, SIP allows researchers to go beyond understanding which microbes are present in a sample, … proposal calls to the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … this was the first workshop of its kind on SIP metagenomics,” Malmstrom said.  Increasingly, efforts like …
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