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Natural Prodcast Episode 22: Alison Narayan
Welcome back to Natural Prodcast. This continues the series of interviews we recorded at the Society for Industrial Microbiology and Biotechnology (SIMB) … talking with a lot of people who actually have been classically trained in synthetic chemistry as were you and then …
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JGI on the 2021 Highly Cited Researchers List
… in their chosen field or fields through the publication of multiple highly cited papers during the last decade.” … the JGI.) Igor Grigoriev hosted two JGI Engagement Webinars promoting the JGI fungal data portal MycoCosm and the algal … detected in the samples. Simon Roux co-organized the Viral EcoGenomics & Applications (VEGA) Symposium series. …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… communities than ever before — especially with the prospect of meta-analyses boosted by AI and Machine Learning — JGI … any given time, many species in a community may be in ‘low power mode’, where they do very little.  SIP experiments can … this was the first workshop of its kind on SIP metagenomics,” Malmstrom said.  Increasingly, efforts like …
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Expanding standards in viromics: in silico evaluation of dsDNA viral genome identification, classification, and auxiliary metabolic gene curation
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Water mass age structures the auxiliary metabolic gene content of free-living and particle-attached deep ocean viral communities
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Nitrosococcus watsonii sp. nov., a new species of marine obligate ammonia‐oxidizing bacteria that is not omnipresent in the world's oceans: calls to validate the names ‘Nitrosococcus halophilus’ and ‘Nitrosomonas mobilis’
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … the JGI has pioneered, including single-cell genomics and metagenomics. The GEBA initiative has also utilized a very … the team. These strains have been characterized physiologically and enzymatically, with descriptions of how their …
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Rex Malmstrom
Dr. Malmstrom is a Staff Scientist and leader of the Microscale Applications group. Before joining the JGI … His group also handles the Stable Isotope Probing (SIP) Metagenomics pipeline  that reveals in situ functional …   A centimeter-long bacterium with DNA contained in metabolically active, membrane-bound organelles. Science  …
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Non-contiguous finished genome sequence of plant-growth promoting Serratia proteamaculans S4
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Tuning of Gene Expression in Clostridium phytofermentans Using Synthetic Promoters and CRISPRi
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Promoter elements associated with RNA Pol II stalling in the Drosophila embryo
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Assembling the Marine Metagenome, One Cell at a Time
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