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JGI on the 2021 Highly Cited Researchers List
… team that combined field data with a reference switchgrass genome to associate climate adaptations with switchgrass … Tanja Woyke were among JGI staff who mentored students this past year, through programs including the JGI-UC Merced … a series of webinars featuring aspects of the Integrated Microbial Genomes & Microbiomes (IMG/M) Nikos Kyrpides was …
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Protocol for single-cell isolation and genome amplification of environmental microbial eukaryotes for genomic analysis
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Microbial species delineation using whole genome sequences
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Improving Microbial Genome Annotations in an Integrated Database Context
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The DOE-JGI Standard Operating Procedure for the Annotations of Microbial Genomes
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Abiotic selection of microbial genome size in the global ocean
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… 2015, Adam Session was a postdoc working at the DOE Joint Genome Institute with Dan Rokhsar, who also holds a joint … known as polyploidy. The multiple copies arise from past genome duplication, which occurs in two basic ways. In … the subgenomes we came up with a simple series of events leading from multiple small wild strawberry species …
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Natural Prodcast Episode 22: Alison Narayan
… enzymes to do chemical reactions. Obviously, in my work, in genome mining, we have an awful lot of crossover, where us genome miners get really jazzed about finding enzymes that …
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A One-Stop Shop for Analyzing Algal Genomes
… genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one place where you can … tools created by JGI researchers, including the Integrated Microbial Genomes and Microbiomes (IMG/M) system for microbial and metagenome datasets, MycoCosm for comparative …
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Computationally Classifying Fungal Lifestyles
… Machine learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a proof of … that “taught” a computer how to classify 101 representative genomes of Dothideomycetes, the largest class of fungi, by … and also provides more information about speciation events. …
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Genomic Encyclopedia of Type Strains, Phase I: The one thousand microbial genomes (KMG-I) project
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The genomic standards consortium: bringing standards to life for microbial ecology
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