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JGI Workshops at PAG
… we will present current and ongoing developments at the JGI and KBase toward integrative biology and hear from … We will describe how to apply for a project with the JGI Community Science Program and how you can use the KBase …
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Nigel Mouncey
… as a senior research scientist at Roche Vitamins, Inc. in New Jersey and DSM Nutritional Products in Switzerland, and … and today, focuses on continuing to build and position JGI as a leading integrative genome science user facility.  … is also on the Leadership Team of the National Microbiome Data Collaborative and served as President of the Society …
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A Sorghum Pangenome Opens More Doors to Discovery
… Biotechnology Genome Sequencing Center and a member of the JGI Plant Program. Lovell was a senior author on this work … genetic variation more closely with gene function and find new ways to implement traits of interest in crops. … with resequencing of 1,984 cultivars and landraces, these data capture the diversity of this crop across geographic …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number … it, viruses are most likely in your system and in your data, and they’re probably influencing the microbes there,” … have better, easier access to these viral genomes. The new database was called IMG/VR. It featured samples from …
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Informatics Advisory Committee
… The IAC is chartered by the JGI Chief Informatics Officer (CIO) and reports to the JGI Director. The IAC is chartered to render advice, … effective management and strategic objectives for the JGI’s data science, informatics and information technology (IT) …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
… to the 2023 Highly Cited Researchers from the JGI recognized for their “significant influence in their … Nikos Kyrpides, Natalia Ivanova and Simon Roux, along with data from a consortium that included Susannah Tringe and … and Roux also worked together on the development of a new software tool called geNomad that identifies and …
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… As part of the JGI’s 25th anniversary celebration, the 2022 Annual Meeting … Kuhn in his 25th Anniversary presentation. “Those driven by new tools and those driven by new concepts.” Patrinos went … one second. “It isn’t just the generation of vast troves of data, it’s the new areas of scientific possibility that …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… researchers searching for sequences of RNA viruses in large data sets, their work may be akin to finding a single … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … higher-level classifications of virus groups (phyla.) The new sequences are filling in some gaps on existing virus …
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Workforce Development & Education Outreach
… Outreach at JGI takes many forms: We offer internship opportunities … opportunities and ultimately, an understanding of the JGI’s role in enabling complex biological and environmental … The JGI and UC Merced have had a long-standing internship … Modeled on the JGI-UC Merced internship program, a similar collaboration …
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Environmental Genomics Group
… Our research focuses on the assembly of metagenomic sequence data into microbial genomes, which is of fundamental value … rapid processing and analysis of large amounts of genomic data. In particular we focus on the integration and comparison of thousands of metagenomic datasets, to enable our users to identify patterns and …
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Identifying genomic data use with the Data Citation Explorer
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JGI Scientists Pen Genome Watch Articles
… Tanja Woyke and other JGI researchers made their debut writing for the Nature … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … metabolism . And postdoctoral researcher Sara Calhoun, data scientist Stephen Mondo, and  Fungal and Algal program …
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